Pairwise Alignments

Query, 423 a.a., Tyrosine recombinase XerC from Xanthobacter sp. DMC5

Subject, 330 a.a., site-specific tyrosine recombinase XerC from Sinorhizobium meliloti 1021

 Score = 44.3 bits (103), Expect = 6e-09
 Identities = 78/304 (25%), Positives = 118/304 (38%), Gaps = 28/304 (9%)

Query: 109 LAEARAGNILGRKNRPIKASSLDMDASRIRTHITPLIGKRVVRHLT----IADVEQMQAD 164
           +AE R       + R +   ++D      R  +T L G     HL     ++D+  ++  
Sbjct: 32  MAERRRWLASLAEERRLSEKTVDAYERDTRQFLTFLTG-----HLAGPPRLSDICALRPA 86

Query: 165 VKNGKTARPRAGGRGGKASGGAGVAGRCVGTLQAIIGHAKHKGLLSEHPTKGAKKLTGNK 224
              G  A+ R GG G +  G  G+AG     L++ + + +  GL +     GA +     
Sbjct: 87  DLRGFLAQRRKGGAGARTLG-RGLAG-----LRSFLRYLERNGLANAAGA-GAVRSPKQP 139

Query: 225 KSRRLSVAEIEALGTAIAYAERNGENPTAL---GVLRLLLLTGYRREEAQAMRREWVHPK 281
           KS   ++ + EAL    A A+   E   A     VL LL   G R  EA  +        
Sbjct: 140 KSLPKALTDREALKVVTADAQLAEEPWIAARNAAVLTLLYGCGLRIAEALDLTPADFSGP 199

Query: 282 GGYVAFPDTKGDAQIRAIGPAALRIVDAQPTVAGNPHVFPSD-ITDG-------PFTAVS 333
              +      G  +I  +  AA   V+    +    H+ P + I  G       P     
Sbjct: 200 VTSLRVTGKGGKTRIVPMIAAAAEAVETYRKLCPY-HIEPEEPIFRGARGAKLQPAIIQR 258

Query: 334 SCLDRVCTLASINGATPHTLRHTFGSVAGDLGFSELTIRAMLGHASRSVTQDYIHIDEAL 393
                   L   + ATPH LRH+F +     G    TI+ +LGHAS S TQ Y  +D A 
Sbjct: 259 EMQKLRAALGLPDSATPHALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVDSAR 318

Query: 394 KLAV 397
            L +
Sbjct: 319 LLEI 322