Pairwise Alignments

Query, 550 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis JJ

 Score =  196 bits (499), Expect = 1e-54
 Identities = 167/548 (30%), Positives = 260/548 (47%), Gaps = 43/548 (7%)

Query: 24  FLDRAAEVYPDRTAVIYGE--VRYTWRMFAQRCRQLASALISAGIERGDTVSIFSLNTPA 81
           F ++ A+  PDR  ++Y +  +R+T++ F +R   LA  L+  GI++GD + I++ N P 
Sbjct: 11  FFEKQAQKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPD 70

Query: 82  MLEAQFGIPLSGAVINCLNSRLDAPAVAFILAHSEARIFLVDRQLAPVAQ-EALRLMEAP 140
            L   F     G V+  +N+   +  +A+++  S+ +   +      V   E L  +   
Sbjct: 71  WLTFMFATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPE 130

Query: 141 PRVIDIDDPSGADFPLLGDTEY-------------ETFI----AAGDPAAELRWPQDEWD 183
            +       +  +FP L +  Y             E  +     + +   E +   D  D
Sbjct: 131 LKTSQRGKLNSEEFPYLKNVIYVGQEKHRGMYNTNELMLLGKYVSDEKLIEAKKGLDSDD 190

Query: 184 AIALNYTSGTTGDPKGVVYHHRGAYLNALGQIINGRMTGARPVYLWTLPLFHCNGWCFA- 242
            I + YTSGTTG PKGV+  H+    N        + T    + L  +PLFHC G     
Sbjct: 191 VINMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTEEERLCL-PVPLFHCFGIVLGV 249

Query: 243 WALAAVGGTQICMRKVSAEGMYQAISEHGVTLLCGAPIVLGFLADGA-PSDWTPPAAPIR 301
            AL   GGT + +       +  AI +   T + G P +  F+A+ + P       + +R
Sbjct: 250 LALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTM--FIAEFSHPMFEMFDLSSLR 307

Query: 302 --VLSGGASPPAPVFKRLGELGF-EVVHLYGMTEMHGVTTLCEPQEAWDDLDIDERMKHV 358
             +++G   P   + K + ++   E+   YG+TE   V T+    + ++        K V
Sbjct: 308 TGIMAGSTCPIEAMKKVMSDMYMHEITISYGLTEASPVFTMTSVDDPFE--------KRV 359

Query: 359 ARQGVRAVLADEMIVGDPLTLEPVPRDGQTIGEVFMRGNIAMKGYLKNPKATEEAFAAD- 417
              G +A+   E+ + DP T + +      +GE+  RG   MKGY K P+ T E    D 
Sbjct: 360 ESVG-KAMPHCEVKIIDPETGKTLAPGN--VGEICCRGYNVMKGYYKMPEKTAEVIEKDG 416

Query: 418 WYHTGDLAVIHDDGYIEVKDRSKDIIISGGENISSIEVEEALYSHPWIAGAAVVAVPDPK 477
           W H+GDLAV  +DGY ++  R KD+II GGENI   E+EE LY+ P I  A VV +PD K
Sbjct: 417 WLHSGDLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTLPGINDAQVVGIPDEK 476

Query: 478 WGETPCAVVELKPGAPGGITEADVIRYCRERLAAYKCPRHV-LFEPLVRTATGKLQKFRL 536
           +GE   A V  K G    I E DV  +  E++A YK P+HV + E    TA+GK+QKF+L
Sbjct: 477 YGEIVGAFVIPKEGYE--IKEEDVRDFALEKIARYKVPKHVFVVEEFPMTASGKIQKFKL 534

Query: 537 RTHAAEQL 544
              A E L
Sbjct: 535 TELAVELL 542