Pairwise Alignments

Query, 273 a.a., HTH-type transcriptional repressor NagR from Xanthobacter sp. DMC5

Subject, 236 a.a., histidine utilization repressor from Vibrio cholerae E7946 ATCC 55056

 Score = 67.0 bits (162), Expect = 4e-16
 Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 19/236 (8%)

Query: 27  PLYAQIKQRLIGLIL--KWDQGDRRFFSDEQLCAMFSVSRDTARQAVAELVQEGLLTRSR 84
           P Y QIKQ ++  I   +W  G R   ++ +L   F VSR T  +A+ +LV EG L R  
Sbjct: 3   PRYLQIKQFMLDNIESGRWPVGYRTP-TELELTEQFGVSRMTVNKALRDLVSEGKLQRRP 61

Query: 85  GLGTFVSVRKLEERFNPGMDFLN---QWAATGMPMQATVLAFERIAADETIAAGLETEIG 141
            LGTFV   + E+  +P +D  N   +  + G      V+    ++ADE +A  L   +G
Sbjct: 62  RLGTFVCAAE-EKAESPLLDIRNIADEILSRGKQYHNKVVEQRALSADEAVAIKLGVMVG 120

Query: 142 AKVLFIKRLRAAARVPLAIDYRY-----LPADLTADWTEEAVHGSPLHRLWQAVDLKTGD 196
           + V + + +  A  +P+ ++ R+     +P  L  D+T+     +P   L Q   L   +
Sbjct: 121 SPVFYSEIIHYANDIPMQLEVRWVNSRSVPHYLDQDFTQI----TPNQYLSQNCPLSAIE 176

Query: 197 FTIEAGVAGPEEVEYLHLSKGAPVLIRALSYRDATGRLALSGHTVHRADLVRYSLS 252
            T+EA VA     + L L+   P L+  L+ R  +G   +S   ++     RY LS
Sbjct: 177 HTVEAIVADAHVKQALALAANEPCLL--LNRRTWSGDKLVSSALLYHPG-SRYKLS 229