Pairwise Alignments

Query, 293 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 297 a.a., inner-membrane translocator (RefSeq) from Shewanella loihica PV-4

 Score =  151 bits (381), Expect = 2e-41
 Identities = 92/293 (31%), Positives = 158/293 (53%), Gaps = 7/293 (2%)

Query: 7   LLQVLSAGIGTGAVYALVALGFNVVFKSTGAMNFAQGEWVVMGGMVTALLIGTFS-GTGL 65
           L+Q++  G+  G +Y +V + F +V+KST  +NFAQGE++++G  V    +  F     +
Sbjct: 6   LIQLIINGLIVGLLYGVVGMCFVLVYKSTQIVNFAQGEFLLVGAWVCWAFLTYFQLPFFV 65

Query: 66  AVVTAVVLVGIIGLLSERLTVQPLKRPDALVITLVTIGLSIVTRSLVMLVLGKKPVGYAG 125
             +  +  + + G+L + + ++P+     + + +VTIGLSI  +SL   + G  P  Y  
Sbjct: 66  GFLFTLCFMAVFGVLLQMIVLRPMIGEPIISVIMVTIGLSIFFQSLTKWIFGVSPQSYPQ 125

Query: 126 FSGNTALSFGGVSIQSQTLWIIAITLAFLVVMHAFFERTILGKALRAAAADREAAAIVGV 185
                +++  G++I+   L    I +  +     FF+ +  G A+RA A D++ A  +G+
Sbjct: 126 VFDTQSIAIFGLNIELAYLMSTVIAILIMAAFFLFFKYSKHGLAMRATAFDQQVAQSLGI 185

Query: 186 NVGSTVLLSFGIAALAGALAGAIVTPLTLASYDQGAMFGFKGFSAAMLGGLGSLPGAVVG 245
           +V     +S+GIAA   A AG ++  +   S D  +  G K F A +LGGL S+ GA+VG
Sbjct: 186 SVKQVFAMSWGIAATVSATAGVVIGMVNGVS-DSLSTIGIKVFPAVILGGLDSIVGAIVG 244

Query: 246 GLALGLLEAFGSFYIS-----SDFKDAIAFAVLLLILFVRPSGLLGRADIVKV 293
           G+ +G+LE    F+ S      +  D   F VLL+IL+ +P GL G  DI ++
Sbjct: 245 GVVIGVLENIAEFFDSQWLHIGNMYDIAPFYVLLVILWFKPYGLFGTRDIERI 297