Pairwise Alignments

Query, 333 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 407 a.a., proline/arginine ABC transporter, permease component (from data) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  172 bits (436), Expect = 1e-47
 Identities = 95/298 (31%), Positives = 162/298 (54%), Gaps = 4/298 (1%)

Query: 23  RHARLALVWLALAAVPFVVPNAYWISLANLALINLVLIASLNLLMGYGGQISLAHAGFFG 82
           R   L  V +  A +P +V + Y  ++   AL+ ++L   LN+++G  GQ+ L +  F+ 
Sbjct: 89  RTPALLAVLVVFAVLPMLV-STYQTNIMISALLYVMLGLGLNIVVGLSGQLVLGYVAFYA 147

Query: 83  LGAYASGILNVRYGLPPWAGLPAAAVVAGLGALLIGIPALRLRGHYLAMATLGWNAILVV 142
           +GAYA  +LN  +GL  W  LP    +A +  +L+G P LRL+G YLA+ TLG+  I+ +
Sbjct: 148 VGAYAYALLNADFGLGFWTVLPIGGALAAVFGILLGFPVLRLKGDYLAIVTLGFGEIVRL 207

Query: 143 FFTQLVGLTGGPNGLLGVEPFSIFGHALDTEAKA---FPLAWAVAFLVMLAISNLLASRI 199
                  +T GP+G+  +    +FG  L         + L  A     + A+  L  SRI
Sbjct: 208 VLENWGSVTRGPSGISKIARPGLFGMELSVSEATTYIYYLILAAVIFTIFAVGRLKDSRI 267

Query: 200 GRSIRAVATNELGAQSLGIGSFRTKLAVFVLSAGMAGIAGSLYVHINQYASPETFGIAPS 259
           GR+ +A+  +E+  +++GI    TKL  F L A  AG AG ++     + +P +F    S
Sbjct: 268 GRAWQALREDEIACEAMGIDLTTTKLTAFALGACWAGFAGVIFAAKTTFINPASFTFLES 327

Query: 260 IMLLVMVAIGGAGTFYGPMLGALIYTAVPQILLDYEDAELMLFGLGLLVVLILFPRGL 317
            M+L MV +GG G+  G +LGAL+   +P+ L  + +  +++FG  ++++++  P+GL
Sbjct: 328 AMILAMVVLGGMGSTLGVVLGALVLILLPEYLRAFSEYRMLIFGAAMVLMMVFRPQGL 385