Pairwise Alignments

Query, 429 a.a., Diaminopimelate decarboxylase from Xanthobacter sp. DMC5

Subject, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 98/382 (25%), Positives = 162/382 (42%), Gaps = 54/382 (14%)

Query: 39  PVYCFRPDVLAADAAAF---LAAFPGKTAYAVKTNGEPMVLDVLARAGINAFDVASPAEF 95
           P+Y +    L     AF   +  +P    YAVK N    VL+ LAR G + FD+ S  E 
Sbjct: 29  PLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLG-SGFDIVSVGEL 87

Query: 96  AAARAA-APGAELFYMHPVKAQSDIRLALEHYRIRATALDHEDEVAKIVRIVRALDLD-P 153
               AA    +++ +    K +++++ AL+  +I+   ++ E E+ ++ ++   L +  P
Sbjct: 88  ERVLAAGGDPSKVVFSGVGKTEAEMKRALQ-LKIKCFNVESEPELQRLNKVAGELGVKAP 146

Query: 154 EDLTLFVRIASKGEAAYEL---SRKFGAAPGHAAEL------LQRIDGLGIRCGLCFHVG 204
             L +   + +K            KFG     AA++      L  +D  GI C    H+G
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNLDVHGIDC----HIG 202

Query: 205 SQVEDVDTYARAVATAAEVRDAAK---VPISVLDVGGGFPATYAVDPRRPVPPMPPLGEI 261
           SQ+  +  +  A      + D+ K   + I  LDVGGG    Y    R  +PP P   E 
Sbjct: 203 SQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVY----RDELPPQP--SEY 256

Query: 262 VGGLMGAVERHGFSGIPLVAEPGRVIVARAFSVIVRVLLKKGQR--------LYINDGVW 313
              L+  +ERH    + L+ EPGR I A A  ++ +V   K             +ND + 
Sbjct: 257 AKALLDRLERH--RDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIR 314

Query: 314 SSLSDSWTGKILLPVRHIPDPARRRRPGRADVMAPFRIYGATCDSVDVLSRPFYLPESVD 373
            +L  +W   I L          R R G A     + + G  C++ D L +   L   + 
Sbjct: 315 PALYQAWQDIIPL----------RPRQGEAQT---YDLVGPVCETSDFLGKDRDL--VLQ 359

Query: 374 TGDWIEIGHIGAYSLSLRTRFN 395
            GD + +   GAY  ++ + +N
Sbjct: 360 EGDLLAVRSSGAYGFTMSSNYN 381