Pairwise Alignments

Query, 293 a.a., Cbb3-type cytochrome c oxidase subunit FixP from Xanthobacter sp. DMC5

Subject, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

 Score =  181 bits (458), Expect = 3e-50
 Identities = 114/296 (38%), Positives = 152/296 (51%), Gaps = 43/296 (14%)

Query: 21  GHEWDGISELNNPLPRWWLWVWYACIVWAIGYWILYPAWPLVSSATPGLLGWHS------ 74
           GHE+DGI ELNNPLP+WW +++    ++A  Y  LYP       +  G+LGW S      
Sbjct: 41  GHEYDGIRELNNPLPKWWTYLFIGTFIFAAIYLTLYPGL----GSFKGILGWQSSDQTVR 96

Query: 75  -----RSAVAV------------QIADLNAIRSESAAKLA----NASLEQIEQTPALLSL 113
                R+++A             ++ D  A   E+  +LA      +L +I    A  S 
Sbjct: 97  SLEESRASIAAAQQNKQLVQYSKELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAAD-SD 155

Query: 114 ARAQGRVAFADNCAPCHGAGGGGATGFPNLNDDDWLWGGSLEQIQQTIEHGIRANDPDTR 173
           A   G+  F  NC+ CHG+   G  GFPNL DD WL+GG  + I  TI HG        R
Sbjct: 156 ALKVGQRLFLQNCSQCHGSDARGQKGFPNLTDDAWLYGGEPQAIVTTIRHG--------R 207

Query: 174 QGNMPAFGKDGILQKPEISAVADYVRTLSGIAKPGADYDKGKEVFASNCAACHGDDGKGN 233
            G MPA+ KD IL +  +  V  Y  +LSG +    + + GK  FA  C+ACHG DGKGN
Sbjct: 208 IGQMPAW-KD-ILGEQGVKEVVSYTLSLSGRSVNAKEAEAGKARFAV-CSACHGTDGKGN 264

Query: 234 QEMGAPNLTDGIWLYGSDKATIEYGVINGRGNVMPSWHARLDPTTIKALTVYVHSL 289
              GAPNLTD  WL+G  +A +   V+NGR  VMP+W   L    I+ +  YV SL
Sbjct: 265 PAFGAPNLTDNDWLFGDSRAEVTETVMNGRSGVMPAWINTLGEEKIQLVAAYVWSL 320