Pairwise Alignments

Query, 554 a.a., Cytochrome c oxidase subunit 1 , bacteroid from Xanthobacter sp. DMC5

Subject, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

 Score =  614 bits (1584), Expect = e-180
 Identities = 281/460 (61%), Positives = 356/460 (77%), Gaps = 2/460 (0%)

Query: 84  NYNMGVVKFATVAAVVWGIAGFLVGVIAALQLAFPIVNLDLPWISFGRLRPLHTSAVIFA 143
           NYN  VV+  T+  ++WGI G  VGV+ A QL +P +N D PW+++ RLRPLHT+AVIFA
Sbjct: 12  NYNYTVVRQFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRPLHTNAVIFA 71

Query: 144 FGGNVLLATSFYVVQRTSRARLAGDLAPWFVILGYNFFIVIAGTGYLLGITQGKEYAEPE 203
           FG + L ATS+YVVQRT + RL G     F   G+   IV A     LG T GKEYAE E
Sbjct: 72  FGTSALFATSYYVVQRTCQTRLFGGPLVPFTFWGWQAIIVSAAITLPLGYTSGKEYAELE 131

Query: 204 WYSDLFLTVVWVTYLLVFLVTLLKRNEPHIYVANWFYLAFIITIAVLHLGNNATIPVSVF 263
           W  D+ +  VWV Y +VF  TL+KR   HIYVANWF+ AFIIT+AVLH+ N+  +PVS+ 
Sbjct: 132 WPIDIAIAAVWVAYAVVFFGTLVKRKTSHIYVANWFFGAFIITVAVLHIVNSMALPVSM- 190

Query: 264 SPKSYILWSGVQDAMFQWWYGHNAVGFFLTAGFLALMYYFIPKRAERPVYSYRLSIVHFW 323
             KSY +++G  DAM QWWYGHNAVGF LTAGFL +MYYF+PK+AERPVYSYRLSIVHFW
Sbjct: 191 -GKSYSIYAGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFW 249

Query: 324 ALIFIYIWAGPHHLHYTALPDWAQTLGMTFSVILWMPSWGGMINGLMTLSGAWDKLRTDP 383
           ALI +YIWAGPHHLHYTALPDW Q+LGM  S++L+ PSWGGMING+MTLSGAW KLR DP
Sbjct: 250 ALISLYIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAWHKLRYDP 309

Query: 384 VIRMMVVAVAFYGMSTFEGPMMSVKAVNSLSHYTEWTIGHVHSGALGWVAYISFGAIYCL 443
           ++R ++V+++FYGMSTFEGPMMS+K VN+LSHYT+WTIGHVHSGALGWVA +S G++Y L
Sbjct: 310 ILRFLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSVYHL 369

Query: 444 VPWLWNKREMYSVKAINWHFWVSTLGIVLYISSMWVAGILQGLMWRAYTQLGFLEYSFIE 503
           +P L+ +  MYSV  IN HFW++T+G VLYI +MW++G++QGLMWRA    G L YSF+E
Sbjct: 370 IPRLFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGVMQGLMWRAVNSDGTLTYSFVE 429

Query: 504 TVEAMHPLYVIRALGGILFLTGALIMAWNVWKTITTPQTA 543
           +V+A +P Y +R +GG +FL+G  +MA+N +KTI+ P+ +
Sbjct: 430 SVQASYPFYTVRFIGGFIFLSGMFLMAYNAYKTISAPKNS 469