Pairwise Alignments

Query, 554 a.a., Cytochrome c oxidase subunit 1 , bacteroid from Xanthobacter sp. DMC5

Subject, 551 a.a., cbb3-type cytochrome c oxidase subunit I from Sinorhizobium meliloti 1021

 Score =  622 bits (1605), Expect = 0.0
 Identities = 281/522 (53%), Positives = 374/522 (71%), Gaps = 5/522 (0%)

Query: 25  VFSLFALFSIVVAAKAYTPEYAFHAYLFAAASIASVFAIGNRYMNRPAGAVPQFIDGKPN 84
           +  + A+  I +AA         H  +    S+A ++ I +     P    P  I     
Sbjct: 15  ILLVLAIVGIAMAAAGRFDPLGVHGAVVLLYSLALLYLIMSSSFGPPPD--PSRIS---R 69

Query: 85  YNMGVVKFATVAAVVWGIAGFLVGVIAALQLAFPIVNLDLPWISFGRLRPLHTSAVIFAF 144
           Y    +K      + W I G  +GV AA QLA+P +N D  W SFGR+RP HT+ VIF F
Sbjct: 70  YYDDPIKAGVWFTLFWAIFGMFIGVWAAAQLAWPSLNFDTAWASFGRIRPAHTTGVIFGF 129

Query: 145 GGNVLLATSFYVVQRTSRARLAGDLAPWFVILGYNFFIVIAGTGYLLGITQGKEYAEPEW 204
           GGN L+ATSF+VVQRTSRARLA  L+PWFV+ GYN F ++A TGY +G+TQ KEYAE EW
Sbjct: 130 GGNALIATSFHVVQRTSRARLADQLSPWFVLFGYNLFCILAVTGYFMGVTQSKEYAEAEW 189

Query: 205 YSDLFLTVVWVTYLLVFLVTLLKRNEPHIYVANWFYLAFIITIAVLHLGNNATIPVSVFS 264
           Y+DL+L +VWVTY ++++ TL +R EPHIYVANW+Y+AFI+ +A+LH+ NN T+PVS+  
Sbjct: 190 YADLWLVIVWVTYFILYIRTLARRREPHIYVANWYYMAFIVVVAILHIINNLTVPVSLGH 249

Query: 265 PKSYILWSGVQDAMFQWWYGHNAVGFFLTAGFLALMYYFIPKRAERPVYSYRLSIVHFWA 324
            KSY +WSGVQD+M QWWYGHNAV FFLTAGFLA++YY++PKRAERP++SYRLSI+ FW 
Sbjct: 250 AKSYTIWSGVQDSMVQWWYGHNAVAFFLTAGFLAMLYYYLPKRAERPIFSYRLSILSFWG 309

Query: 325 LIFIYIWAGPHHLHYTALPDWAQTLGMTFSVILWMPSWGGMINGLMTLSGAWDKLRTDPV 384
           + F Y+WAG HHLHYTALP W Q LGMTFSV+L +PSW    N L+TL+GAW K+R D  
Sbjct: 310 ITFFYMWAGSHHLHYTALPHWVQNLGMTFSVMLLVPSWASAGNALLTLNGAWHKVRDDAT 369

Query: 385 IRMMVVAVAFYGMSTFEGPMMSVKAVNSLSHYTEWTIGHVHSGALGWVAYISFGAIYCLV 444
           +R +++A  FYG+STFEG  ++V+ VNSLSHYT+WT+GHVH+GALGWVA I++G++Y LV
Sbjct: 370 LRFIMMAAFFYGLSTFEGSFLAVRPVNSLSHYTDWTVGHVHAGALGWVALITYGSLYTLV 429

Query: 445 PWLWNKREMYSVKAINWHFWVSTLGIVLYISSMWVAGILQGLMWRAYTQLGFLEYSFIET 504
           P +W +  MYS   +  HFW++  G V+Y+ +MW +GI+QGLMWR YT  G L YSF+++
Sbjct: 430 PAIWKRERMYSAALVEVHFWLAFAGTVIYVFAMWNSGIIQGLMWRTYTGDGTLAYSFVDS 489

Query: 505 VEAMHPLYVIRALGGILFLTGALIMAWNVWKTITTPQTAAER 546
           + AM+P Y+ RA GG+LFL GA++  +N+W T+      AER
Sbjct: 490 LVAMYPYYIARAFGGLLFLIGAVVATYNIWMTVRGVPALAER 531