Pairwise Alignments

Query, 305 a.a., Putrescine transport system permease protein PotH from Xanthobacter sp. DMC5

Subject, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

 Score =  193 bits (491), Expect = 3e-54
 Identities = 109/277 (39%), Positives = 158/277 (57%), Gaps = 27/277 (9%)

Query: 21  WLLALFLAPFLIVFKISLSQDVVAQPPYAPQLDLSNGLAGITEFLSGLSFANYGYVLDFS 80
           WL+   L P L++   S                L+   A + +F    +F NY  +LD  
Sbjct: 19  WLVLFVLIPNLMIIGTSF---------------LTRDEANLIKF--AFTFENYTRLLD-- 59

Query: 81  NEFLEAYGS----SLVIASISTLLLLLVGYPIAYGMARAPRSIQPTLLMLVILPFWTSFL 136
                 YG     S  +A ++TL+ L++GYP AY +A+ P   +P +L L+I+PFWT+ L
Sbjct: 60  ----PLYGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSL 115

Query: 137 IRVYAWIGILSPEGLLNQGLMALGVIDTPLEILNTNLAVYIGIVYSYLPFMVLPLYSALE 196
           IR Y    +L  +G+LNQ LM+LG+ID PL I+ T  AV IG+VY  LPFM+LPLYSA+E
Sbjct: 116 IRTYGLKIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIE 175

Query: 197 KLDLTLLEAAADLGCPPVKAFWKITFPLSIPGVAAGALLCFIPAVGEFVIPDLLGGSDTL 256
           KLD T +EAA DLG    +   ++  PL++PG+  G LL  +PA+G F I DLLGG+  L
Sbjct: 176 KLDGTYIEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNL 235

Query: 257 MIGKSLWTEFTVNRSWTVSSAVAVLLLLVLVIPIVIY 293
           +IG  + ++    R W   +A ++ L L + I +  Y
Sbjct: 236 LIGNVIKSQVLNARDWPFGAATSIALTLAMAIMLYAY 272