Pairwise Alignments

Query, 253 a.a., putative ATP-dependent transporter SufC from Xanthobacter sp. DMC5

Subject, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 25/240 (10%)

Query: 3   PLLEIKDLHAEIAGGRKIINGMNLTINPGEVHAIMGPNGAGKSTLSYVLSGKPGYEITGG 62
           PLL ++D+  +  G  + + G++  + PGE  A++G +G+GKSTL+  L      E   G
Sbjct: 274 PLLSVRDVR-KTYGSFEALKGISFDLMPGETMAVVGESGSGKSTLARALLRLD--EPDSG 330

Query: 63  EVIFRGVNLLDLSPDE--RAAQGLFLCFQYPLEIPG--------VSNMAFLHTAVNSQRK 112
             +++G +L  LSP E  +  + L + FQ P +           +S    +H  +  + K
Sbjct: 331 TALWKGRDLFALSPAELYKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAK 390

Query: 113 KRGEVELTSPELVRKVRELGKTLGIDADMLKRPVNVGFSGGEKKRNETLQMMLLEPYFCV 172
            R            +V EL   +G+ A+ + R  +  FSGG+++R    + + LEP   +
Sbjct: 391 WR-----------ERVAELLVQVGLSAEHMSRYPH-QFSGGQRQRIAIARALALEPQLII 438

Query: 173 LDEADSGLDIDALKVVSNGVNALRSPERSMLVITHYQRLLDYIVPDVVHVFNAGRIVHTG 232
            DEA S LD+     V   ++ LR       +   +   +     D V V   G +V  G
Sbjct: 439 CDEAVSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELG 498



 Score = 60.8 bits (146), Expect = 6e-14
 Identities = 64/247 (25%), Positives = 107/247 (43%), Gaps = 31/247 (12%)

Query: 4   LLEIKDLHAEI---AGGRKIINGMNLTINPGEVHAIMGPNGAGKSTLSYVLSG---KPGY 57
           LLE+++L  E    AG    +  ++  ++ GE  AI+G +G+GKS  S  +      P  
Sbjct: 5   LLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPPG 64

Query: 58  EITGGEVIFRGVNLLDLSPDERA---AQGLFLCFQYPLEIPG--------VSNMAFLHTA 106
            I+ GE++  G +LL +  +ER     + + + FQ PL            +S     H  
Sbjct: 65  RISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTHGL 124

Query: 107 VNSQRKKRGEVELTSPELVRKVRELGKTLGIDADMLKRPVNVGFSGGEKKRNETLQMMLL 166
             S+ ++         E +R +R +G     + +   R     FSGG+++R      + L
Sbjct: 125 AGSKARE---------EALRLLRRVGIP---EPERAMRKYPHEFSGGQRQRVMIAMALAL 172

Query: 167 EPYFCVLDEADSGLDIDALKVVSNGVNAL-RSPERSMLVITHYQRLLDYIVPDVVHVFNA 225
            P   + DE  + LD+     V   +  L R    ++L+ITH   ++  I   VV V   
Sbjct: 173 RPDLLIADEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVV-VMEK 231

Query: 226 GRIVHTG 232
           G IV  G
Sbjct: 232 GAIVEAG 238