Pairwise Alignments

Query, 592 a.a., Nif-specific regulatory protein from Xanthobacter sp. DMC5

Subject, 584 a.a., nif-specific transcriptional activator NifA from Rhodopseudomonas palustris CGA009

 Score =  804 bits (2077), Expect = 0.0
 Identities = 424/597 (71%), Positives = 495/597 (82%), Gaps = 18/597 (3%)

Query: 1   MVQQEALQIEREQPRSHV--PLVSLSDVALTGIYEISKILTAPNRLETTLSSVVNLLSSF 58
           M Q+E   ++ E P   +  P + LSD+ALTGI+EISKILT+P RLE TL++VVNLL SF
Sbjct: 1   MAQREIRLVDNEYPSPSMTHPPIPLSDIALTGIFEISKILTSPARLEITLANVVNLLQSF 60

Query: 59  MQMRHGVISLLEDDGIPDITVGGGWNEGTDARYRARLPEKAIGQVIATAVPLIAENVASH 118
           +QMR+GV+SLL DDG+PDITVG GWNEG+D RYRARLP+KAI Q++ATAVPL+A+NV++H
Sbjct: 61  LQMRNGVVSLLADDGVPDITVGVGWNEGSDNRYRARLPQKAIDQIVATAVPLVADNVSAH 120

Query: 119 PAFSEADAQALGASEDSRVSFIGVPIRVASRVIGTLTIDRVWDGRSVFRLDSDVRFLTMV 178
           P F+ ADA ALGA+++ RVSFIGVPIR+ SRV+GTL+IDRV DGRS FR+D+DVRFLTMV
Sbjct: 121 PMFTAADAMALGATDEIRVSFIGVPIRIDSRVVGTLSIDRVRDGRSHFRMDADVRFLTMV 180

Query: 179 ANLIGQTVQLHRVVSRDRERLMAESGRLQKELSELKPTSAGRERKRVYVDGIIGDSREIR 238
           ANLIGQTV+LHRVV+RDRERLMAES RLQKELSELKP    RERKRV VDGI+G+S  IR
Sbjct: 181 ANLIGQTVKLHRVVARDRERLMAESHRLQKELSELKPE---RERKRVKVDGIVGESPAIR 237

Query: 239 GLLDKIMIVAKSHSPVLLRGESGTGKELIAKAIHELSPRAKGPFIKLNCAALPESVLESE 298
            LL K+ I+AKS SPVLLRGESGTGKELIAKAIHELS RA GPFIK+NCAALPESVLESE
Sbjct: 238 KLLAKVSIIAKSQSPVLLRGESGTGKELIAKAIHELSARANGPFIKINCAALPESVLESE 297

Query: 299 LFGHEKGAFTGAVGARKGRFELADKGTLFLDEIGEISPSFQAKLLRVLQEQEFERVGGSH 358
           LFGHEKGAFTGA+ +RKGRFELADKGTLFLDEIGEIS SFQAKLLRVLQEQEFERVGG+ 
Sbjct: 298 LFGHEKGAFTGAIASRKGRFELADKGTLFLDEIGEISASFQAKLLRVLQEQEFERVGGNQ 357

Query: 359 TLKVNVRVVAATNKNLEEAVAKNEFRADLYYRISVIPVIVPSLRDRRGDIPLLANEFLDR 418
           T+KVNVR+VAATN+NLEEAVA+ EFRADLYYRI+V+P+I+P LRDR  DIPLLA+EFL  
Sbjct: 358 TIKVNVRIVAATNRNLEEAVARKEFRADLYYRINVVPMILPPLRDRPSDIPLLASEFLKN 417

Query: 419 FNRENGRDLHFNQDAMDVLMGCGFPGNVRELENCVQRTATLAQGGSIVGDDFACRHNECL 478
           FN+ENGR+L F   A+D+L  C FPGNVRELENCV+RTATLA G  I   DFAC  +ECL
Sbjct: 418 FNKENGRELAFESHALDLLKACSFPGNVRELENCVRRTATLAMGPEIRDSDFACHQDECL 477

Query: 479 SALLWRSPAD-APQTRRPMEIPLPVMPPLSAISGEAANSNTVPRLPPLTVPVPTPAPAVP 537
           SA+LW+  A+ AP+  RP EIPL V+P       +A      PR P  +     PA   P
Sbjct: 478 SAILWKGHAEPAPERPRP-EIPLQVLP------RKAPVEIVHPREPVASADDFAPA---P 527

Query: 538 VRATVLDEE--MSERERLVDAMERAGWVQAKAARLLGLTPRQIGYALKKHDIEIKRF 592
           VR+ +  +E  MSERERL++AMERAGWVQAKAAR+LGLTPRQIGYALKKH+IE+K F
Sbjct: 528 VRSEMPSDESNMSERERLINAMERAGWVQAKAARILGLTPRQIGYALKKHNIELKHF 584