Pairwise Alignments

Query, 352 a.a., Putative FAD-dependent oxidoreductase LodB from Xanthobacter sp. DMC5

Subject, 406 a.a., Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family from Pseudomonas stutzeri RCH2

 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 89/342 (26%), Positives = 139/342 (40%), Gaps = 45/342 (13%)

Query: 1   MSCDLLVAGAGPAGSAAAIAAAGRGLRVVLLHDARSQVW---PGESLPPGMAGLVDAA-- 55
           M  DL++ GAG  GS  A+A  G GL +V+L  +  +V    P     P ++ L  A+  
Sbjct: 1   MQADLVIVGAGMVGSTLALALEGCGLDIVVLDASPLEVATFDPSGDFEPRVSALSAASQR 60

Query: 56  ------FGPGLLDEDRHLVAYGTRSCWGSDDLIETDFLANPLGG---GWLLDRARFDADA 106
                   PG+    R +  Y     W      +  F A  +     G +++        
Sbjct: 61  ILQRVGAWPGMAA--RRVSPYTDMHVWDGSGTGQIHFSAETVHAEVLGHIVENRVVQDAL 118

Query: 107 RARAEAAGATLVAG--RMEGIASTPDGWEVTLRDGRLLAARFVLDATGRAAAVARHIGSG 164
               ++ G   + G  R+E +  T DGW++TL DGR L    V+ A G  +A+ R  G  
Sbjct: 119 LETMQSHGQVRLLGNARVEQLLCTTDGWQLTLVDGRELRTPLVIAADGANSAIRRLAGCE 178

Query: 165 RQAFD-RQVALVATLDDADPYRGTSVEAVAD-GWWYTTPL--PGGRR---VLAFLTDADL 217
            + +D    A+V ++   DP++ T+ +   D G     PL   G R    ++  +T+A+ 
Sbjct: 179 TREWDYLHQAIVTSVRCRDPHQRTAWQRFTDHGPLAFLPLERDGDRHWCSIVCSVTEAE- 237

Query: 218 LGDGVASWARRLEATLHMRRLAGAGAG---------AAVPRTS-PAETAAGRTLYGPRWC 267
                   A RL A   +   A  G            A PR   P      +    P   
Sbjct: 238 --------ATRLMALDDVAFRAALGRAFEERLGEVLEADPRLCIPLRQRHAKRYVQPGLA 289

Query: 268 AAGDAAMTFDPLSSQGISAAILMGARAGGLVAQALA-GEGAA 308
             GDAA T  PL+ QG++  +L  A    ++  A+A GE  A
Sbjct: 290 LIGDAAHTIHPLAGQGVNLGLLDAAVLAEVLRAAIARGERVA 331