Pairwise Alignments

Query, 227 a.a., HTH-type transcriptional repressor NicS from Xanthobacter sp. DMC5

Subject, 225 a.a., Transcriptional regulator, TetR family from Pseudomonas fluorescens FW300-N2E2

 Score =  157 bits (398), Expect = 1e-43
 Identities = 85/220 (38%), Positives = 129/220 (58%)

Query: 6   PARKAARSSNAAPQREAATRDADKTRLNILEAAEAEFAAKGLAGARVDVVAEEAGANKRM 65
           P   AA        R++   + +KTR NIL+ A  EF  +GLAGARVD +AE    +KRM
Sbjct: 5   PELSAALDEPVVAPRKSRKNNPEKTRENILQEAIVEFVQQGLAGARVDAIAERIHTSKRM 64

Query: 66  IYYYFGSKEDLYLAVLERVYTDMRIAEAELALEAMAPLEAITCLTEFKFDYPAQHPHLIP 125
           IYYYFGSKE LY+ VLE++Y D+R  E+ L L  +AP++AI  L EF FD+  ++   + 
Sbjct: 65  IYYYFGSKEQLYVEVLEKLYGDIRTTESRLHLAELAPVDAIRRLVEFTFDHHDRNVDFVR 124

Query: 126 LLNSENLLGGEYLRRSLRLREMQISLIARLEAILARGAADGTLRAGIDPLHLYLTISAVS 185
           ++  EN+   EY+++S  ++ M  +++  L  IL RGA +G  R  + PL ++L IS+  
Sbjct: 125 IVCIENIHNAEYVKQSGAIKAMTNTILDSLGVILRRGAEEGVFRPDLQPLDVHLLISSFC 184

Query: 186 YFYFSNNPTLSTAFGRDLATPDERAARRRHVVDVVTRYIE 225
           ++  SN  T    F  DL+    +   R+ V + V RY++
Sbjct: 185 FYRVSNRQTFGEIFQIDLSDEAIKQRHRQMVCESVLRYLQ 224