Pairwise Alignments

Query, 657 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 626 a.a., ATP-dependent endonuclease from Methanococcus maripaludis S2

 Score = 87.4 bits (215), Expect = 2e-21
 Identities = 126/552 (22%), Positives = 217/552 (39%), Gaps = 79/552 (14%)

Query: 3   LKSVRIQNLRAYLDETINFED-YTCLVGANGAGKSTVLCALNIFFRETENSSTNLSNLDK 61
           L  V I+N R+  +  + F+     +VG N AGKS ++ A++I   E         N+ K
Sbjct: 3   LSKVHIENYRSIKELDLTFDQGKNVIVGKNNAGKSNIIKAIDIVLGERVPDWNKYENISK 62

Query: 62  EDFHKGNIENPIEITVTFGDLSPEAKETFSDYVRHDFLIVTAKAEFDESSGIATVKQYGS 121
            DF   +    I I     +LS E  E         F  V   A F      +  +QY  
Sbjct: 63  SDFFNADTSEDILIVC---ELSKEHGENLK------FSNVNNSAFFKVCK--SNNEQYHV 111

Query: 122 RLGMEEFSSYFKLMGDGGKADALKSIYASL---REHYSGLP--SEAKTKDAMASALREYE 176
              + +    F    + G  D    IY  +    ++Y  +    E    D  A   R   
Sbjct: 112 N-DLSDIDRIFYFTSEKGSIDLDSGIYRKIWIGGKNYCKIDYDDEFSNVDRYALVFRARF 170

Query: 177 AQN----SSLCVPIPSEDQFYGATYGQGRLREH-IQWVYVPAVKDAAGEQAEAKNTALGR 231
            +N      + +    +++ +        LR + IQ   +P+ +D   +      T  G+
Sbjct: 171 EENVIKKDLVLLYKKDDEEEWTVGINANSLRGNLIQSAIIPSFRDPKDQLRINNYTWFGK 230

Query: 232 LLARTVRAK--VNFVDRLADIRADAEGKYREMLTLQQEALNDISSTIQARLTEWSHPDAT 289
           LL    + +      + L ++  ++   + E   LQ+   ND    IQ      + P+ +
Sbjct: 231 LLKEYTKGRNGEGIKEALKNLATESNQVFEE---LQKSVCND---NIQI-----AFPNTS 279

Query: 290 AKLQWHQDPKSSVRIEEPIAK--LVAGDGEFEGSIARFGHGMQRSYIIALLQGLSISDAS 347
             +Q++ DPK     ++ I K  L+  D  F+  +   G G+Q +  I L        A 
Sbjct: 280 FSVQYNPDPK-----DQDIYKSALIYVDDGFKSELKDKGSGIQSAMTIGLFNFYIKHIAH 334

Query: 348 GPKLVLGIEEPELYQHPPQARHLSNVLQD-LSKKNAQIIASTHSPYFVDGNNFERVRLVR 406
               +L IEEPELY HP   R +S+ L + + +   Q+I +THSP F+   N E + L+ 
Sbjct: 335 NSGSLLAIEEPELYLHPHGRRIISDRLSEFIGEDENQVILTTHSPEFICCAN-ENINLIV 393

Query: 407 KIKESGESVVCSCSIEELGDKYAAATGDKPQIRAGVAAKLNQVM-QPHLSEMFFTSSLVL 465
             K+  ES   +    ++                    K  Q++ +   SEMFF  +++L
Sbjct: 394 VKKDKSESKAYNLQFNDI--------------------KTRQILIKKQNSEMFFADAVLL 433

Query: 466 VEGLEDLAYINAWLVLSGRWEKFRSRGS------------HVVAADGKSELIRPTIIAKT 513
           VEG  D   +  +    G  ++ +S                ++   GK+EL +   +   
Sbjct: 434 VEG-ADKYILEEFSKEYGETKQVKSESELLGKNWLNNYNVSIINCGGKTELQKYVAVLNN 492

Query: 514 MNIPLFVLFDCD 525
           ++IP + L D D
Sbjct: 493 LSIPNYTLADFD 504