Pairwise Alignments

Query, 267 a.a., Shikimate dehydrogenase (NADP(+)) from Xanthobacter sp. DMC5

Subject, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

 Score = 80.1 bits (196), Expect = 5e-20
 Identities = 73/261 (27%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 9   YAIIGDPVGHVRTPLVFNAYFAEHG----IDAVCVPIHIRPDQLETAMAGLKAIANLDGF 64
           YA+ G+P+ H ++P +   +  +        A CVP+    D    A     A     G 
Sbjct: 8   YAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPV----DGFTEAAKHFFAQGGR-GC 62

Query: 65  IVTAPHKARVAGIVDRLVGDGDKVGAVNTVRREADGTFTGTMLDGHGFVAGLAKAGWGPQ 124
            VT P K       DRL       GAVNT+++  DG   G   DG G V  L       +
Sbjct: 63  NVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLK 122

Query: 125 GKSVYIAGAGGAASAIAFALAGAGMARLTIFDRTPAMGQALLARVKAAYPQIEAAFGTRD 184
           G ++ + GAGGAA  +   L     A +T+ +RT A  +  LA + AAY +++A    + 
Sbjct: 123 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQ-LAELVAAYGEVKAQAFEQL 181

Query: 185 PSGHDLAVNATPLGLEPSDPFSFDVEKADPETLVAEVLMKPDTTALLHAAAARGCA-IHQ 243
              +D+ +N+T   L+   P + D       ++  +++     T     A   GCA    
Sbjct: 182 KQSYDVIINSTSASLDGELP-AIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAID 240

Query: 244 GKHMLDGQ-RDLMMAYFGLAP 263
           G  ML GQ  +  M + GL P
Sbjct: 241 GLGMLVGQAAESFMLWRGLRP 261