Pairwise Alignments

Query, 629 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 456 a.a., TRAP transporter, DctM subunit from Pseudomonas stutzeri RCH2

 Score =  173 bits (439), Expect = 1e-47
 Identities = 123/354 (34%), Positives = 186/354 (52%), Gaps = 48/354 (13%)

Query: 242 LGVLVAYS-----AAVATVVMRDTGIKAGADY----AILAIC-VAVVVALVSALLNRFLG 291
           +G+L+A S     A+VA + M   G    A+Y    A+   C V  +  L+   +   L 
Sbjct: 119 VGILLAASTGIVGASVALLGMLSIGPMLQANYNKSLAVGTACSVGTLGILIPPSIMLVLM 178

Query: 292 ARRLVLS-AVLTAAFAGAYVMLRESGHPTAGLMADIVAAGALYAFIAGGVER-FTGMP-- 347
           A RL  S A +   F GA +          G+M  ++    LY  I   +++ F   P  
Sbjct: 179 ADRLGTSEASVGKLFMGALI---------PGMMLALMYI--LYIVIVAWLKKDFAPAPVN 227

Query: 348 ---LVSRMAERVTFVMVPPLLLIFLVLGTIFLGVATPTEGGAMGALGAMVLAALKRRLEK 404
              L +R    V + +VPPL LIF VLG+IF G+AT TE  A+GA GA+++AA  RRL  
Sbjct: 228 RPKLDARALLDVFWAVVPPLALIFAVLGSIFFGIATTTEASAVGAFGALLMAAASRRL-- 285

Query: 405 NPARFSLSILTQATQTTAKLSAFAIFIVVGARVFSLTFYGINGHLWVEHLLTSLPGGQMG 464
                +L +L  A   T++ +AF   I +GA VF+    G+ G   +   LT LP GQ G
Sbjct: 286 -----NLPVLKDALYQTSRTAAFIFGIFIGATVFAAVLRGLGGDDVIRAALTGLPFGQTG 340

Query: 465 FLLFINALIFVLAFFLDFFELAFIVVPLLAPAADKLGIDLIWLGVMLGVNMQTSFMHPPF 524
            LL + A+ F+L FFLD+ E+  I++PL+AP    +G+D +W  ++  + +QTSF+ PP 
Sbjct: 341 VLLTVLAITFLLGFFLDWVEITLIILPLVAPVLFSMGVDPLWFAILFALCLQTSFLTPPV 400

Query: 525 GFALFYLRSVAPKTAYLDRLTGKRMEPVTSAQIYWGAIPFVVIQLVMVGLIAAF 578
           GFALFY++ V P               +T+  +Y G +P++VIQL+ + L+  F
Sbjct: 401 GFALFYIKGVCP-------------PGITTRDVYLGVLPYIVIQLIGLALVFYF 441



 Score =  171 bits (434), Expect = 5e-47
 Identities = 88/213 (41%), Positives = 144/213 (67%), Gaps = 4/213 (1%)

Query: 13  MFATLVVFMLLGYPVAFALAANGLLFFFIAVELSPYAPDAITLSWP-LLQALPERVFGTM 71
           MFA+ +  +LLG+PVA++LA  GLLF  +   L  +    +  +W   +  L  R++G +
Sbjct: 11  MFASFMGLLLLGFPVAWSLAGIGLLFAVLGYVLVEHFDANLWFTWDGTIGVLDARIYGIV 70

Query: 72  ANEVLLAIPFFTFMGLVLERSGMAEDLLETIGQLFGTVRGGLAYAVIFVGALLAATTGVV 131
           ANE+++A+P F FMG++L+RSG+AE L+ ++ ++ G +RGG A  V+ VG LLAA+TG+V
Sbjct: 71  ANELMVALPLFIFMGIMLDRSGIAERLMHSLVRVLGPLRGGYAVTVVVVGILLAASTGIV 130

Query: 132 AASVISMGLISLPIMLRYGYDRRLASGVIAASGTLAQIIPPSLVLIVMADQLG---RSVG 188
            ASV  +G++S+  ML+  Y++ LA G   + GTL  +IPPS++L++MAD+LG    SVG
Sbjct: 131 GASVALLGMLSIGPMLQANYNKSLAVGTACSVGTLGILIPPSIMLVLMADRLGTSEASVG 190

Query: 189 DMYEGAFLPGLVLSGLYALFVFVVTIVSPKSAP 221
            ++ GA +PG++L+ +Y L++ +V  +    AP
Sbjct: 191 KLFMGALIPGMMLALMYILYIVIVAWLKKDFAP 223