Pairwise Alignments

Query, 629 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  106 bits (264), Expect = 2e-27
 Identities = 96/364 (26%), Positives = 167/364 (45%), Gaps = 31/364 (8%)

Query: 12  IMFATLVVFMLLGYPVAFALAANGLLFFFIAVELSPYAPDAITLSWPLLQALPERVFGTM 71
           ++F  ++  M++G P+A +L  + +LF     + S             L ++ + +F   
Sbjct: 5   LLFILVIGMMIVGVPIAISLGLSSILFLLWHSDAS-------------LASVAQTLFNAF 51

Query: 72  ANE-VLLAIPFFTFMGLVLERSGMAEDLLETIGQLFGTVRGGLAYAVIFVGALLAATTGV 130
           A    LLAIPFF      +   G+A+ ++     + G  RGGLA A +    + AA +G 
Sbjct: 52  AGHYTLLAIPFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGS 111

Query: 131 VAASVISMGLISLPIMLRYGYDRRLASGVIAASGTLAQIIPPSLVLIVMADQLGRSVGDM 190
             A+V+++G I +  M++ GY +  A+GVI  +GTL  +IPPS+V++V +     SVG M
Sbjct: 112 SPATVVAIGSIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRM 171

Query: 191 YEGAFLPGLVLSGLYALFVFVVTIVSPKSAPGLP----REALTCCEPSGARGVWQLGVLV 246
           + G  +PGL L+GL  +    +T    K+ P  P    +EAL   + +     W L ++V
Sbjct: 172 FLGGVVPGL-LAGLMLIIAIYIT-ARIKNLPKQPFVGWKEALKAAKEAS----WGLLLVV 225

Query: 247 AYSAAVATVVMRDTGIKAGADYAILAICVAVVVALVSALLNRFLGARRLVLSAVLTAAFA 306
                +   +   T  +A A  A+ +  +A  +             + +++  V T    
Sbjct: 226 IILGGIYGGIFTPT--EAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHK 283

Query: 307 GAYVMLRESGHPTAGLMADIVAAGALYAFIAGGVERFTGM---PLVSRMAERVTFVMVPP 363
                L ++G  T  LM   + A AL        ER   M    ++S     +TF++V  
Sbjct: 284 DTKATLYDAGKLTIMLM--FIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVN 341

Query: 364 LLLI 367
           L+L+
Sbjct: 342 LILL 345



 Score = 77.8 bits (190), Expect = 9e-19
 Identities = 89/351 (25%), Positives = 146/351 (41%), Gaps = 45/351 (12%)

Query: 251 AVATVV--MRDTGIKAGADYAILAICVAVVVALVSALLNRFLGARRLVLSAVLTAAFAGA 308
           A+A+VV  M    +   +   ++AI   V+  +V    ++   A  +  +  L      +
Sbjct: 95  AIASVVACMMFAALSGSSPATVVAIGSIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPS 154

Query: 309 YVMLRES------------GHPTAGLMADIVAAGALYAFIAGGVERFTGMPLVS-RMAER 355
            VM+  S            G    GL+A ++   A+Y  I   ++     P V  + A +
Sbjct: 155 IVMVVYSAATNVSVGRMFLGGVVPGLLAGLMLIIAIY--ITARIKNLPKQPFVGWKEALK 212

Query: 356 VTFVMVPPLLLIFLVLGTIFLGVATPTEGGAMGALGAMVLAALKRRLEKNPARFSLS--- 412
                   LLL+ ++LG I+ G+ TPTE  A+ A+ +  +A    R +  P     +   
Sbjct: 213 AAKEASWGLLLVVIILGGIYGGIFTPTEAAAVAAVYSFFIANFIYR-DMGPFADKTNTKP 271

Query: 413 ILTQATQTTAKLSAFAIFIVVGARVFSLTFYGINGHLWVEHLLT-------------SLP 459
           +L +  +T       A     G     L F   N  L ++H+LT             S  
Sbjct: 272 VLVKVVETFVHKDTKATLYDAGKLTIMLMFIIANA-LILKHVLTEERIPQMITESMLSAG 330

Query: 460 GGQMGFLLFINALIFVLAFFLDFFELAFIVVPLLAPAADKLGIDLIWLGVMLGVNMQTSF 519
            G + FL+ +N ++ V   F++   L  IV PL+ P A  LGID I LG+M+ VNM+   
Sbjct: 331 LGPITFLIVVNLILLVGGQFMEPSGLLVIVAPLVFPIAIALGIDPIHLGIMMVVNMEIGM 390

Query: 520 MHPPFGFALFYLRSVAPKTAYLDRLTGKRMEPVTSAQIYWGAIPFVVIQLV 570
           + PP G  LF    VA  +          M  V  A + W  + F+ + +V
Sbjct: 391 ITPPVGLNLFVTSGVAKMS----------MMNVVKAALPWVGVMFLFLIIV 431