Pairwise Alignments

Query, 629 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 427 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score =  112 bits (280), Expect = 3e-29
 Identities = 81/272 (29%), Positives = 133/272 (48%), Gaps = 21/272 (7%)

Query: 10  APIMFATLVVFMLLGYPVAFALAANGLLFFFIAVELSPYAPDAITLSWPLLQALPERVFG 69
           A I+F  L+  ML G P++ +L    L F F             T++   ++++  ++F 
Sbjct: 3   AAIIFGLLLALMLTGMPISISLGLTVLTFLF-------------TMTQVPIESVALKLFT 49

Query: 70  TMANEVLLAIPFFTFMGLVLERSGMAEDLLETIGQLFGTVRGGLAYAVIFVGALLAATTG 129
            +    ++AIPFF   G  L   G+A  ++     + G   GGL  A +   AL AA +G
Sbjct: 50  GIEKFEIMAIPFFILAGNFLTHGGVARRMINFASAMVGHFYGGLGLAGVLACALFAAVSG 109

Query: 130 VVAASVISMGLISLPIMLRYGYDRRLASGVIAASGTLAQIIPPSLVLIVMADQLGRSVGD 189
              A+V+++G I LP M+R G+  R  +GVI  SG L  +IPPS+V+++ +     SVG 
Sbjct: 110 SSPATVVAIGSILLPAMVRAGFPNRFGAGVITTSGALGILIPPSIVMVMYSVATNTSVGA 169

Query: 190 MYEGAFLPGLVLSGLYALFVFVVTIVSPK--SAPGLPREALTCCEPSGARGVWQLGVLVA 247
           ++    +PGL+L    A  + +VT    K    P +P+ +      +  + VW L ++V 
Sbjct: 170 LFMAGVIPGLLL----AFTLGMVTWYRAKKFDYPRMPKASWGERWVAFRKSVWGLMLIVI 225

Query: 248 YSAAVATVVMRDTGIKAGADYAILAICVAVVV 279
               + T +   T  +A A  A+ A  VAV V
Sbjct: 226 VMGGIYTGMFTPT--EAAAMSAVYAFIVAVFV 255



 Score = 95.5 bits (236), Expect = 4e-24
 Identities = 84/274 (30%), Positives = 123/274 (44%), Gaps = 27/274 (9%)

Query: 276 AVVVALVSALL---------NRFLGARRLVLSAVLTAAFAGAYVMLRESGHPTAGLMADI 326
           A VVA+ S LL         NRF GA  +  S  L      + VM+  S      + A  
Sbjct: 113 ATVVAIGSILLPAMVRAGFPNRF-GAGVITTSGALGILIPPSIVMVMYSVATNTSVGALF 171

Query: 327 VAA---GALYAFIAGGVERFTG-------MPLVSRMAERVTF-VMVPPLLLIFLVLGTIF 375
           +A    G L AF  G V  +         MP  S     V F   V  L+LI +V+G I+
Sbjct: 172 MAGVIPGLLLAFTLGMVTWYRAKKFDYPRMPKASWGERWVAFRKSVWGLMLIVIVMGGIY 231

Query: 376 LGVATPTEGGAMGALGAMVLAALKRRLEKNPARFSLSILTQATQTTAKLSAFAIFIVVGA 435
            G+ TPTE  AM A+ A ++A    +         L  + +    +A +SA  ++I+  A
Sbjct: 232 TGMFTPTEAAAMSAVYAFIVAVFVYK------DMGLKQIPKVLLDSANMSAMLLYIITNA 285

Query: 436 RVFSLTFYGINGHLWVEHLLTSLPGGQMGFLLFINALIFVLAFFLDFFELAFIVVPLLAP 495
            +FS      N    +   L     G + FLL +N L+ V   F++   +  I+ P+L P
Sbjct: 286 VLFSFLMTNENIPQLLAEWLLDKGLGPIAFLLAVNVLLLVAGNFMEPSSIVLIMAPILFP 345

Query: 496 AADKLGIDLIWLGVMLGVNMQTSFMHPPFGFALF 529
            A KLGID +  G+++ VNM+    HPP G  L+
Sbjct: 346 VAVKLGIDPVHFGILIVVNMEVGMCHPPVGLNLY 379