Pairwise Alignments

Query, 295 a.a., Motility protein A from Xanthobacter sp. DMC5

Subject, 246 a.a., Flagellar motor component from Pseudomonas stutzeri RCH2

 Score = 55.8 bits (133), Expect = 9e-13
 Identities = 57/262 (21%), Positives = 104/262 (39%), Gaps = 38/262 (14%)

Query: 1   VAVIIGIILGLAATFGGFMAMGGHPEVVWQPFEYLIIGGIAFSTFIIANPLSVIKDTGSG 60
           V  +IG++L   A  GG    GGH   +      LI+ G      ++  P++V       
Sbjct: 3   VLSLIGLLLAFVAIVGGNFLEGGHISALLNGPAALIVLGGTLGAVLLQTPIAVF------ 56

Query: 61  IMQAAMGTG-----PKRKDFLALLSLLYALMRDMRQKPRNEIEAHIDDPASSALFGHFPS 115
               AM  G     P R D    + ++       R++                L G  P 
Sbjct: 57  --MRAMSIGRWIFFPPRIDLARGILMVTTWSNTARKE---------------GLLGLEPV 99

Query: 116 LLKDKELTQYICDYARL---ILIGNAKSHEIEALMEQEISTIKKHKTKAAGALGTVAEAL 172
              + +       YAR    +L+  A+   I +++E ++ T +    +AA    ++    
Sbjct: 100 AETEPD------PYARKGLQLLVDGAEPEVIRSILEVDLYTQESRDLRAAKVYESMGGYS 153

Query: 173 PALGICAAVLGIVKAMGAIDQSPEILGHYIGSALIGTFVGIYSSYAIISPLAAKVKSTRE 232
           P +GI  AV+G++  MG +   P  LG  I  A + T  G+  +  ++ P+  K+KS  +
Sbjct: 154 PTIGIIGAVMGLIHVMGNL-ADPSQLGSGIAVAFVATIYGVAFANLLVLPIGNKLKSVVQ 212

Query: 233 KQCQPFIITKQALIAFMNGALP 254
           +Q     +  + +++   G  P
Sbjct: 213 RQTAYREMLLEGVLSIAEGENP 234