Pairwise Alignments

Query, 358 a.a., Flagellar biosynthetic protein FlhB from Xanthobacter sp. DMC5

Subject, 377 a.a., flagellar biosynthesis protein FlhB (RefSeq) from Shewanella loihica PV-4

 Score =  191 bits (486), Expect = 2e-53
 Identities = 119/363 (32%), Positives = 190/363 (52%), Gaps = 27/363 (7%)

Query: 1   MSEEQDKESKTEEASEKKISDAVEKGNVPFSREAALFASLLGILAILAFFVTAP------ 54
           M++    + KTEEA+ ++   A EKG V  S+E    A L+   A + F V  P      
Sbjct: 1   MADNDTSQEKTEEATPRRREQAREKGQVARSKELGTSAVLMS--AAVGFAVIGPSLGQSL 58

Query: 55  ----VRLLTADLSRLIDDPAGFPISTGNDAVSILWGALAGAGRFLMPMVIVLMLAGLVAS 110
                +L T     + D  + F     N  + +          F++ +  +  L  +V  
Sbjct: 59  MSVMTKLFTMSRQEIYDTNSLF-----NIWMMVFKELAIPMASFVLFLAFIAFLGNVVLG 113

Query: 111 GFQNVPSLVAERIRPQWSRVSPSAGFKRIFGTQGHIEFGKALFKLFAIGIVAALVLYAQE 170
           G     +  A+   P+ ++++P +GFKR+FG Q  +E  K + K   + ++A L+L    
Sbjct: 114 GI----TFSAKAFMPKGNKMNPISGFKRMFGVQALVELTKGIAKFSVVALMAYLLLSYYF 169

Query: 171 HEVVNAMFTDPLRLPSVL---LALAMRLVATVCVVTIGLVAADIVWSRVSWKTNLRMTKQ 227
           ++++         LP  +   L L + +   +C  T+ +V  D+ +   +    LRMTKQ
Sbjct: 170 NDILTL---SQGHLPGNVYNALDLLVWMFIVLCSSTVIIVVIDVPFQIWNHNKQLRMTKQ 226

Query: 228 EVKDEFKQAEGDPMVKARIRAVARERARQRMMNAVPKATVVIANPTHYAVALQYDRQTGG 287
           E+KDE+K  EG P VK R+R + RE A++RMM  VP A V++ NP HYAVA++YD     
Sbjct: 227 EIKDEYKDTEGQPEVKGRVRQMQREMAQRRMMAEVPNADVIVVNPEHYAVAVKYDVTKAA 286

Query: 288 APLVVAKGVDLIALKIREIAERHGVPVIEDRPLARALFAAVEVDQWIPQDFYRPVAKILH 347
           AP V+AKGVD +A KIREIA  H V ++   PLARA++   ++DQ IP+  +  VA++L 
Sbjct: 287 APYVLAKGVDDVAFKIREIAREHDVAIVSAPPLARAIYHTTKIDQEIPEGLFTAVAQVLA 346

Query: 348 YIY 350
           Y++
Sbjct: 347 YVF 349