Pairwise Alignments

Query, 378 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 21/188 (11%)

Query: 193 QPTGRPDATTAAAKPGEAQDKAA---AQAAAQAATKAARDLEGEL-KQVVAATVGTAGAA 248
           Q TG   A T+       Q +     AQA ++     A  ++  L +++    +      
Sbjct: 123 QLTGGQSAETSVQDNQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGAIEVENLG 182

Query: 249 PRVDVRATKEGLVVDLTDDLDFSMFPVGSAVPDARFVRAMGEIAKKLGARPGEIVIRGHT 308
            ++D+R  ++G             FP GSA    +F   + +IA+ +   PG++ + GHT
Sbjct: 183 QQIDIRIREKGA------------FPEGSAFLQPKFRPLVRQIAELVKDIPGKVRVTGHT 230

Query: 309 DARPFRSDTY-DNWRLSSARA-QMALYMMVRGGLDEKRVTAIEGLADRNLKNTADPNAPQ 366
           D +   S+ Y  NW LS+ RA  +A  M      D  R+  + GLAD       D  A +
Sbjct: 231 DNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKDFDHLRL-QVRGLADTQPLGPNDTEAQR 289

Query: 367 --NRRIEI 372
             NRR+EI
Sbjct: 290 ATNRRVEI 297