Pairwise Alignments

Query, 206 a.a., Ribonuclease D from Xanthobacter sp. DMC5

Subject, 202 a.a., 3- 5 exonuclease domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 43.5 bits (101), Expect = 3e-09
 Identities = 46/144 (31%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 16  ASSVVAIDTETMGLDPFR----DRLCLVQLSNGDGSADLVQIPQGAGPGSAPNLVRLLTD 71
           + SV+  DTET     FR    +   LVQL+     AD+V + Q         L  LL+D
Sbjct: 48  SDSVLGFDTETR--PTFRKGKVNLPSLVQLA----CADVVYLIQLNWVPLGEMLADLLSD 101

Query: 72  PNVTKLFHFGRFDIAVLQHTFKVMPQPVWCTKIASRLVRTYTDRHGLKDLLRELINVDIS 131
           P + K     R DI  LQ  +      V      +R +   T  HGL++L    + + IS
Sbjct: 102 PAIIKTGVAVRDDIRDLQKLYAFRDGGVVDLGEVARDLGLET--HGLRNLAANFLGIRIS 159

Query: 132 KQQQSSDWGAADLSDAQLSYAASD 155
           K  Q S+W   +L   Q+ YAA+D
Sbjct: 160 KGAQCSNWSNRELGPQQVVYAATD 183