Pairwise Alignments

Query, 604 a.a., Uptake hydrogenase large subunit from Xanthobacter sp. DMC5

Subject, 410 a.a., coenzyme F420 hydrogenase subunit alpha from Methanococcus maripaludis S2

 Score = 71.2 bits (173), Expect = 8e-17
 Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 3/109 (2%)

Query: 15  GKRIVVDPVTRIEGHMRCEVNVDSNNIIR--NAVSTGTMWRGLEVILKGRDPRDAWAFVE 72
           GK + ++P TR EGH +  + VD + I+   N +S  T  RG E  L G+    A   V 
Sbjct: 2   GKTVEINPTTRHEGHTKLVLKVDDDGIVEKGNYLSV-TPVRGFEKFLVGKVAEFAPIAVS 60

Query: 73  RICGVCTGCHALTSVRAVEDALQIKIPNNAFLIREIMAKVLQWHDHVVH 121
           R CG+C   HA +SV A+EDA  I  P +  L+RE+     + H H +H
Sbjct: 61  RFCGICPIAHATSSVEAIEDACGITPPKDGLLLRELTGLGNKMHSHPLH 109



 Score = 43.5 bits (101), Expect = 2e-08
 Identities = 51/195 (26%), Positives = 71/195 (36%), Gaps = 52/195 (26%)

Query: 401 PRWKGNAVEVGPLARYILAYAQGVDYVKGQVDEALGTFNTLAGTNLTAKQALPTTIGRTL 460
           PR+ G  +EVGP AR+   +                        +   K A+   I    
Sbjct: 255 PRYNGRLMEVGPRARFAKFH------------------------DFKNKGAMAIHI---- 286

Query: 461 ARALEAHYCAKMMLDDFDHLIANIKAGDTSTANMEKWDPATWPKEAKGVGTVAAPRGGLG 520
           ARA E     K  ++  D L  N K            +P     E  G+G   A RG   
Sbjct: 287 ARAYENVVHVKRAMEIIDELDVNGKTRSN--------EPILGDGEKIGLGVHEAARGHNT 338

Query: 521 HWIKIK-DGRIENYQCVVPTTWNGGPRDPKGNIGAFEASLMNTPMQRPEEPVEILRTLHS 579
           H   I   GRI  Y  +V TTWN         I     +   T  +  E  V       +
Sbjct: 339 HQAAIDAKGRITYYNAIVATTWN---------IPLIGKATEGTHYKFAEHVVR------A 383

Query: 580 FDPCLACSTHVMSDD 594
           +DPC++C+THV++ D
Sbjct: 384 YDPCVSCATHVIAMD 398