Pairwise Alignments

Query, 374 a.a., Hydrogenase maturation factor HypD from Xanthobacter sp. DMC5

Subject, 386 a.a., hydrogenase expression/formation protein HypD (RefSeq) from Shewanella amazonensis SB2B

 Score =  353 bits (906), Expect = e-102
 Identities = 172/366 (46%), Positives = 238/366 (65%), Gaps = 6/366 (1%)

Query: 7   FRDPALASALVKEIGAIAARLERGRDRPFAIMEVCGGHTHAIFRYGLEGLLPDLVEFVHG 66
           FRD     AL   I + A  L      P  IMEVCGGHTH I +YGL GL+PD V+F+HG
Sbjct: 22  FRDAGTIRALAARINSAAQNLSE----PLYIMEVCGGHTHTIMKYGLLGLIPDNVKFIHG 77

Query: 67  PGCPVCVLPMGRVDDCVDIAERPEVIFTTFGDAMRVPGSKKSLLQAKADGADVRMVYSPL 126
           PGCPVCV+P  R+D  + +A+  +VI  T GD +RVPGSK SL QA+A GADVR +Y PL
Sbjct: 78  PGCPVCVMPKERIDQAIALAKMDDVILLTLGDMIRVPGSKGSLAQARASGADVRPLYDPL 137

Query: 127 DALTLAKSNPEREVVFFGLGFETTMPSTALTVQRALREGVTNFSLFCNHITIIPTLRALL 186
           DAL +A+ NP++ VVFF +GFET+ P TA+ +Q+A    + N     NH+ + P + A++
Sbjct: 138 DALAIARDNPDKTVVFFAIGFETSTPMTAVLLQQAEHAALPNLLFHINHVLVPPAIDAVM 197

Query: 187 EQPDLGIDGFIGPGHVSMVIGTAPYRFIAEEFGRPLVVSGFEPIDLLQSLLMVLRQIEAG 246
            +P   ++ FIGP HVS++ G   YR  A+    P+VVSGFEP+D+++S+L ++      
Sbjct: 198 AEPATKVNAFIGPAHVSVISGAKIYRRAADVHHTPVVVSGFEPVDVMESILRLVELKNLT 257

Query: 247 QARIENQYARVVPEHGNPAALRAVQEVYEPRETFEWRGLGSIAGSGVRLTAPYASFDAER 306
           ++ ++ QY+R V E GN  A   V E +E R++F WRGLG I  S ++L   YA  DAE 
Sbjct: 258 ESVVDVQYSRAVSEEGNLTAQALVDEYFEVRDSFRWRGLGPIPQSALKLKGKYAHRDAEI 317

Query: 307 RFS--VPDIKVADPAQCRCGEVLTGAAKPWACPEFGKGCTPETPLGALMVSSEGSCAAYY 364
            F   +P  ++ D   C+CG++L G A P  C  FG+GCTP+TPLG+ MVSSEG+C AYY
Sbjct: 318 HFGGRLPVQEIDDHKACQCGDILRGLANPMDCKVFGRGCTPQTPLGSCMVSSEGACNAYY 377

Query: 365 QYGGMR 370
           +Y G++
Sbjct: 378 RYHGVQ 383