Pairwise Alignments

Query, 393 a.a., Succinyl-diaminopimelate desuccinylase from Xanthobacter sp. DMC5

Subject, 394 a.a., Acetylornithine deacetylase (EC 3.5.1.16) from Pseudomonas fluorescens FW300-N2E2

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 112/386 (29%), Positives = 160/386 (41%), Gaps = 58/386 (15%)

Query: 7   VKPELRANVPDALTLATELIRAPSVTPDSGGAL-EIVARRLEAFGYHVERLTFDSGGIPI 65
           V  ELR+       L  EL+   +V+ DS  AL E V   L+  G + E L +++     
Sbjct: 5   VMSELRSRA-----LLAELVSFATVSRDSNLALIEFVRDYLQGLGVNSE-LIYNAERTKA 58

Query: 66  PNIYARIGTGAPN-LCFAGHVDVVPEGDPAHWLHGPFAGTVEDGKLFGRGAVDMKGAVAA 124
            N+ A IG   P  +  +GH DVVP    A W   PF  T  DGK FGRG  DMKG +A+
Sbjct: 59  -NLLASIGPAVPGGVVLSGHTDVVPVDGQA-WTVDPFCLTEMDGKWFGRGTADMKGYLAS 116

Query: 125 FLAAA-LAHGRPETGSLSFLITGDEEGPALDGTVKVVEWLKEKGEVIDHCVLGEPTNPQA 183
            LAA  +    P    +    + DEE   L G   ++E L  +      C++GEPT  + 
Sbjct: 117 VLAAVPVFLSSPLRRPVHLAFSYDEEVGCL-GVHSLLEVLVRRIAQPALCLIGEPTQLRP 175

Query: 184 MGDAFKVGRRGSLSGILTVKGVQGHVAYPHLADNPIPRLLKLVGEL------TSAPLDHG 237
           +     +G +G L+    V+G   H AY     N I +  +L+G L       + P  H 
Sbjct: 176 V-----LGHKGKLAMRCHVRGAACHSAYAPYGVNAIEQAARLIGRLGEIGAQLAEPSRHD 230

Query: 238 SDFFPPSNLEVVSIDVGNPVFNLIPAEATARFNVR----FNDLYSLETLKSEIIRRIDGA 293
             F P  +   V +  G    N++PA+    F VR    F+ L  +E L           
Sbjct: 231 PRFDPACSTVQVGVVHGGTALNIVPADCRFDFEVRALPDFDPLVVVEQL----------- 279

Query: 294 GLTYDLAFQPGASQSFLTAPGPFVELVADAVEVE---TGRRPEASTSGGTSDARFIKDIC 350
                   Q  A Q+ L    P ++ VA    +        P  +TS  ++ AR I  +C
Sbjct: 280 --------QGYAEQTLL----PAMQAVAGDTAIRFEPLSAYPGLATSPDSAAARLIAQLC 327

Query: 351 -----PVVEFGLVGQTMHKVDEATPV 371
                  V FG  G   H+    T V
Sbjct: 328 GSDAFGTVAFGTEGGLFHQAGVPTVV 353