Pairwise Alignments

Query, 393 a.a., Succinyl-diaminopimelate desuccinylase from Xanthobacter sp. DMC5

Subject, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

 Score =  293 bits (750), Expect = 6e-84
 Identities = 161/371 (43%), Positives = 222/371 (59%), Gaps = 9/371 (2%)

Query: 19  LTLATELIRAPSVTPDSGGALEIVARRLEAFGYHVERLTFDSGGIPIPNIYARIGTGAPN 78
           L LA ELI   SVTP   G  +++  RL+A G+ +E + F+       N +AR GT +P 
Sbjct: 7   LALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFED----TTNFWARRGTQSPL 62

Query: 79  LCFAGHVDVVPEGDPAHWLHGPFAGTVEDGKLFGRGAVDMKGAVAAFLAAA---LAHGRP 135
             FAGH DVVP G  + W   PF  TV DG L GRGA DMKG++A  + A    +A    
Sbjct: 63  FVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPD 122

Query: 136 ETGSLSFLITGDEEGPALDGTVKVVEWLKEKGEVIDHCVLGEPTNPQAMGDAFKVGRRGS 195
             GS+ FLIT DEEGP ++GTV+VVE L  + E+ID C++GEP++  A+GD  K GRRGS
Sbjct: 123 HQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGS 182

Query: 196 LSGILTVKGVQGHVAYPHLADNPIPRLLKLVGELTSAPLDHGSDFFPPSNLEVVSIDVGN 255
           ++G L VKG QGHVAYPHLA+NP+ + L  + EL +   D G+ +FPP++ ++ ++  G 
Sbjct: 183 ITGDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQIPNLQAGT 242

Query: 256 PVFNLIPAEATARFNVRFNDLYSLETLKSEIIRRIDGAGLTYDLAFQPGASQSFLTAPGP 315
              N+IP E   +FN RF+   + E +K  +   +D  GL YD+ +   + Q FLT  G 
Sbjct: 243 GASNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVKWTL-SGQPFLTDTGE 301

Query: 316 FVELVADAVEVETGRRPEASTSGGTSDARFIKDI-CPVVEFGLVGQTMHKVDEATPVADL 374
            +  V  AVE    + P   T+GGTSD RFI  +   VVE G V  T+HKV+E   +ADL
Sbjct: 302 LLAAVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNATIHKVNECVRIADL 361

Query: 375 EVLKRIYSRII 385
           E L  +Y + +
Sbjct: 362 EKLTDMYQKTL 372