Pairwise Alignments

Query, 441 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

 Score =  211 bits (536), Expect = 3e-59
 Identities = 113/303 (37%), Positives = 180/303 (59%), Gaps = 6/303 (1%)

Query: 67  EANFPQCIANLWPLAQAKGVSRRTFDTYTASLQPQMKIMDFMDSQPEFSKPIGAYVNMLV 126
           E +F Q +  L   A+ +G+S R  +     ++ + + +    +QPE    +  Y+   V
Sbjct: 21  EVSFEQYVERLKQQAREEGISERILNEAFRDVEYKPRSVVADKNQPEKKLTLDEYIPRAV 80

Query: 127 TETRVRKGREILERYKPIFDRAEKAYGVDRYAVTAIWGIESTYGDPDGIGRRNVLESTAT 186
            E +V++ + + E++     R  K YGV    + A+WG+ES +G   G  R  V+++ +T
Sbjct: 81  PEWKVKQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVESNFGAFTGNFR--VIDALST 138

Query: 187 LACIGRRQDYFRDEFIATLQILEKGDVPYDHLKGSWAGAFGPTQFMPTSFQRFAVDFDGD 246
           LA  GRR+++FR E +A LQILE+G +  + +KGSWAGA G  QFMP+SF  FA D +GD
Sbjct: 139 LAYEGRREEFFRKETMAALQILEQGHIAPEAMKGSWAGAMGQCQFMPSSFLNFAADGNGD 198

Query: 247 GKRNVVDSIPDIIASTANNLKLDGWEFGKAWGYEVALPQGFDYRLASRSTK--KTLGEWN 304
           GK+++  +  D+ ASTAN L   GW+    WG +V +P+GFD+ L  R  +  KTL EW+
Sbjct: 199 GKKDIWGTRSDVFASTANYLSQSGWDDKYTWGRQVKIPKGFDHALEGRQPEKGKTLQEWS 258

Query: 305 ALGVRRANGVAFPRPTD--TAYLLLPGGANGPAFLMMKNFDAILKYNPADAYALAIGHLA 362
            LGV R +G   P  +D   A+L++P    G  +L+  N++ ++K+N +  +ALA+ HLA
Sbjct: 259 KLGVTRYDGKPLPALSDDIKAWLIMPDDEAGRIYLVYNNYNVLMKWNRSHYFALAVSHLA 318

Query: 363 DRL 365
           DR+
Sbjct: 319 DRI 321