Pairwise Alignments

Query, 238 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

Subject, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  173 bits (439), Expect = 2e-48
 Identities = 97/229 (42%), Positives = 141/229 (61%), Gaps = 5/229 (2%)

Query: 6   LLIVEDDREIRALLADFLGREGYGVLAAEDGAAMDRILASARPDMVILDLMLPGEDGLSI 65
           +L+++DD E+ +LL + L  EG+ +  A DG A      S   D+++LD+M+P  +G+  
Sbjct: 4   ILLIDDDTELTSLLTEVLQYEGFEISQANDGEA-GLAAVSDEIDLILLDVMMPKLNGMET 62

Query: 66  CRRLRARGGMPILMLTAKGDDVDRIVGLEMGADDYLPKPFNPRELLARIRAVLRRADGTL 125
            +RLR +   P+LMLTAKG+++DR++GLE+GADDYLPKPF+ RELLARIRA+LRR    L
Sbjct: 63  LKRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQNGL 122

Query: 126 AEPTPRNRRVAFAGFVADLDARSVAEADGPLLDLTSAEFELLACFLERPKRVLSRDQLLD 185
              TP+N  V     +     +  A   G LL+LT+ EF LL  F++ P   L+++ L  
Sbjct: 123 ---TPKNSDVIECQDIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEMLSI 179

Query: 186 WTRGRSADPFDRTIDVSVSRLRRKLSAVSEEAALLIKTVRNGGYLLTAD 234
              G+    FDR ID+ VS LR+KL    +  A  IKT+R  GYL+  +
Sbjct: 180 EVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKA-RIKTLRGRGYLMVQE 227