Pairwise Alignments

Query, 438 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

Subject, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  157 bits (398), Expect = 5e-43
 Identities = 108/425 (25%), Positives = 201/425 (47%), Gaps = 25/425 (5%)

Query: 18  IAILASGVWIALGLGLVGLLAMVLTTPVPIGQVLATTVWSASASWTLAALPLFIWMGEIL 77
           + +L +G+ +   L  V L  ++LT    I    A  +     ++TL A+P F+  G ++
Sbjct: 9   LGLLFAGMPVGFSLIFVALAFLILTNSTGIN-FAAQQMLGGIDNFTLLAVPFFVLTGHLM 67

Query: 78  FRTRLSEEMFRGLAPWLQWLPGRLLHVNVIGCGIFAAVSGSSAATCATIGKIALPELDKR 137
               ++E +F      +  + G L HVN++   +F+ +SGS+ A    +G++ +  +   
Sbjct: 68  NSAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDA 127

Query: 138 GYDKGMSLGSLAGSGTLGLLIPPSIPMVVYAVTANVSVLQVFLAGFLPGLL------VMG 191
            Y    + G  A S  +G L+PPS+P+V+Y V +N S+  +FLAG +PGLL      VM 
Sbjct: 128 KYHDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCCIALMVMS 187

Query: 192 LY----SGYIMLWSLLNPGRTPPRDPHMPFAEKLRQSAKLVPCLLLIAAVFLSLVLGIAT 247
            +     GY+ L         P       F         L+  +++I  +F     G  T
Sbjct: 188 YFICKKRGYMTL---------PKASRREQFKSLKEAFLSLLTPVIIIGGIF----SGKFT 234

Query: 248 ATECAAWGVTGALALAW-WSGTLTWKTLIESVMSATRLSCMIMLIIAGAAFTTAAMAYTG 306
            TE AA     AL L      TLT +  IE +      + ++ L++ G       +A   
Sbjct: 235 PTEAAAVSSLYALFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQ 294

Query: 307 IPVALAEWVQGLNLTPGKLALALTVMYIILGCLVDGISMIVLTAVIVLPMVKQAGFDLVW 366
           +P  LA++   ++  P  L L + ++ + LG  ++ +++++L    ++P+    G D V 
Sbjct: 295 LPQMLADYFLTISDNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVH 354

Query: 367 FGVYLVIHVEMAQITPPVGFNLFVLQNMSGRDTFSVAKAAFPFFILLNIAVIIITTFPEI 426
           FGV  ++++ +  +TPP+G  L+V+  +      ++ +   P  + L I + ++  FP+ 
Sbjct: 355 FGVMAILNLMIGILTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQF 414

Query: 427 ALVLP 431
            L+LP
Sbjct: 415 TLLLP 419