Pairwise Alignments

Query, 328 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 363 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component (RefSeq) from Shewanella amazonensis SB2B

 Score = 57.0 bits (136), Expect = 7e-13
 Identities = 72/263 (27%), Positives = 110/263 (41%), Gaps = 27/263 (10%)

Query: 17  AALASTVPAAAQTKWNLASAYPADNFHTENLA--QFAKDVEAASGGKLAVTLQPNAVLFK 74
           AA A+ + +A Q +W LA+++P  NF     A   FA  V+  S G+L + +     L  
Sbjct: 25  AAEATPIDSAKQIEWKLATSWPK-NFPGLGTAPEHFAVMVDEMSAGRLKIKVYGAGELMP 83

Query: 75  APEIKRAVATGQVQAGEVLISIHENEDPI--------FGVDVVPFLA-TSYGASKKLWDA 125
           A E+  AV+ G VQ         + + P         FG++        +YG  ++LW  
Sbjct: 84  ALEVFDAVSQGSVQMAHSASYYWKGKAPAAQFFTSIPFGLNAQEMNGWLTYGGGQELW-- 141

Query: 126 SRPAVEKKLAAQGIKLLYAVPWPPQ--GLFSKNAVAKVEDLKGAKWRAYNAGTSRIGEAV 183
                E+  A  GI  L       Q  G F+K  +  ++DLKG K R    G   +    
Sbjct: 142 -----EEVYAPFGILPLPGGNSGVQMGGWFNKE-INTIDDLKGLKMRLPGLGGEVLKRLE 195

Query: 184 GAQSVTVQQAELAQALATGVVNALITSSATGNDVKIWESIPYFYDIQAWLPKNV---IFV 240
           G   VT+   EL  A+ TG ++A        +       +  +Y    W          +
Sbjct: 196 GVP-VTLPGRELYTAMQTGAIDATEWVGPYNDLAFGLHKVAKYYYYPGWHEPGTTLEFMI 254

Query: 241 NQAAFDALDKPTQEAVLKAAAAA 263
           N+AAF+ L K  Q A++K AA A
Sbjct: 255 NKAAFEKLPKDLQ-AIVKIAAKA 276