Pairwise Alignments

Query, 328 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 336 a.a., TRAP dicarboxylate family transporter (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 54.7 bits (130), Expect = 3e-12
 Identities = 71/301 (23%), Positives = 121/301 (40%), Gaps = 13/301 (4%)

Query: 10  ALLAAGIAALASTVPAAAQTKWNLASAYPADNFHTENLAQFAKDVEAASGGKLAVTLQPN 69
           A+LAAG     S   AA +    LA      N  T    +F + VEA S GK+ + L  N
Sbjct: 17  AMLAAG-----SYAEAAKRITIRLAHPMAPGNNVTLGYEKFKEIVEAKSNGKVRIQLFGN 71

Query: 70  AVLFKAPEIKRAVATGQVQAGEVLISIHENEDPIFGVDVVPFLATSYGASKKLWDA-SRP 128
            +L        A   G ++          N      V  +P++ TS    +KL+ A    
Sbjct: 72  CMLGSDRVTMEATQRGTLEMASSSSPNMTNFSKEMMVFDLPYI-TSPEHQEKLYKALDEG 130

Query: 129 AVEKKL----AAQGIK-LLYAVPWPPQGLFSKNAVAKVEDLKGAKWRAYNAGTS-RIGEA 182
           A+ ++L    A  G+K ++Y+         +K  +   +DLK  K R  ++     +  A
Sbjct: 131 ALGERLDAIAAGIGLKPIMYSEYGYRNFATTKKPIKTADDLKNLKVRTTDSPIEVAVASA 190

Query: 183 VGAQSVTVQQAELAQALATGVVNALITSSATGNDVKIWESIPYFYDIQAWLPKNVIFVNQ 242
           +G     V   E   AL  G V+    +    ND K  E + +  D       +++ +N+
Sbjct: 191 LGMNPTPVSWGETYTALQQGTVDGEGNTFGLLNDAKHTEVLRHAMDSAHNYSMHLLMINK 250

Query: 243 AAFDALDKPTQEAVLKAAAAAEARGWKLSEEKTKAYMDILASKGMTVAPPSPELKAGFEK 302
           A FD L    Q+ ++ +   A A    +S +  K        +G+ +   +PE +A   +
Sbjct: 251 AYFDKLPADVQQILVDSGKEALAYQRAISNDLEKKAEQAFVERGIVITKLAPEERAKMRE 310

Query: 303 I 303
           +
Sbjct: 311 L 311