Pairwise Alignments

Query, 1029 a.a., Multidrug resistance protein MdtC from Xanthobacter sp. DMC5

Subject, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  572 bits (1474), Expect = e-167
 Identities = 330/1008 (32%), Positives = 545/1008 (54%), Gaps = 9/1008 (0%)

Query: 7    LSAWALKHRSVIIYLMAISVVAGVMAFRNLGRAEDPTFVIKTMVVQANWPGATLEETFRQ 66
            ++A+ + +R +   +  I ++ G  AF NLGR EDP F IK  +V  ++PGAT ++   +
Sbjct: 22   VAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEE 81

Query: 67   VTERLERKLQETPQLNFLESYTKPGVTTVFVHLKGSATAAEVPDIWYHVRKSIADIRHTL 126
            VT  LE+ +Q+   ++ + S +  G++ + V +K +    ++P IW  +R+ + D++  L
Sbjct: 82   VTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGAL 141

Query: 127  PQGIVGPFFNDEFGDTFGIIYGFTADGFSHRELRDYVEEARSELLHVPDVSKIEILGAQD 186
            P G+  P   D+FGD +GI+   T +G+S++EL DYV+  R EL  +  VSK+ + G Q 
Sbjct: 142  PPGVNPPLVIDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQ 201

Query: 187  ERIFIEFSMQELASLGIDRQAVLSALAAQNIVRPSGEIQTGKENISIRVSGAFASEADIA 246
            E++FIE SM+ +++LGI  Q V + L+ QN+V  +G I+ G E I I  +G F     + 
Sbjct: 202  EQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLG 261

Query: 247  NVNLAVNGR--LIRLADIATIRRGFADPPQPMFRVNGKDAIGLAIAMRDGGDILAMGANI 304
            ++ L+  G   LI L D+A ++RG+ + P  +   NGK A+ + ++   G +++ +G   
Sbjct: 262  DLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRF 321

Query: 305  DRAMTRILANMPVGIDATLVADQAVTVKSAISEFMESLWQAVGIILVVSFIALGVRAGAI 364
            DR +  +    P+GID   V  Q   V  ++S F+ SL QAV I+++V    +G+R+G +
Sbjct: 322  DRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLL 381

Query: 365  VALAIPLTLAIVFALMQLAHIDMQRISLGALIIALALMVDDAMTTTDATLTRLAAGDDPP 424
            + L + LT+   F  MQ   ID+QRISLGAL+IAL ++VD+A+   +  L     G    
Sbjct: 382  IGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRL 441

Query: 425  TAASYAFKAYAAAMLAGTLVTVAGFVPVGFAASSAGEYTFTLFAVVAIALLVSWIVAVLF 484
             AA+         +L  T++ V  F P+G +  + GEY  TLF V+ I+L++SW  A+  
Sbjct: 442  QAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISL 501

Query: 485  APLLQVLILRAPAKDKIPDPNAPPKG-VMGMYRAFLILCLRLRWVTLAVTAGLFVLSVLA 543
             P    L  R        + + P +G +  +YR FL  C+R  W+T+ V       S+  
Sbjct: 502  TPFFADLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLYG 561

Query: 544  LPLIPRQFFPSSDRPELLVDLASPQNASIYASQSVAEAFDKVLANDPDVARWSTYVGRGA 603
               + + FFPSS  P  +VD+  P+   I A+ ++    +K L+    V   +T  G+G 
Sbjct: 562  FTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAGKGL 621

Query: 604  IRFYLPLDVQLPNDFFAQSVIVAKDVAARERLRVKLEKVLATDFPQLVARISPLELGPPV 663
             RF L    +     + +      D      L  +    L   +PQ+  ++  +ELGP  
Sbjct: 622  QRFMLTYSPEKSYAAYGEITTRVTDYQQLAALMARFRAHLDARYPQINYKLKQIELGPGG 681

Query: 664  GWPVQYRVSGPEIEKVRAIAFDLAKVMAENPQVETVNYNWIEPARQVSIRVDQDEARLLG 723
            G  ++ R+ G +   +R+IA  +  VM  +P    + ++W E  + +  + ++ +AR  G
Sbjct: 682  GAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQARRYG 741

Query: 724  LSTAQLAGVLNTVLSGQPVTQVRDDIYLVNVVARATDEERVSLSSLATLQVPLPG-GRTV 782
            ++ A +   L    SG+ +   RD   L+ +VAR  +EERV + ++  +++  P     +
Sbjct: 742  ITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALSEYI 801

Query: 783  PLSQIAT-FEYGQDYPAIWRRDRVPTLTVQS--DVKRGVLPESVVEKLDPKIEALRRTLP 839
            PL Q+   +E   + P I R++R   LTV +  D+       ++ ++L P+IEA+   LP
Sbjct: 802  PLQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGEETAATLQQRLQPQIEAI--PLP 859

Query: 840  AGYAITTGGTVEESASSLASVVAVVPVMLLLMFTVLMFELKSFQRLVIVLSVAPLGLIGV 899
             GY +  GG  E S  + AS+   +P+  L MF + +F   S +  +IV    PL +IGV
Sbjct: 860  PGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIGV 919

Query: 900  VGALLLSGRPLGFVAILGVLALIGMITKNAVILIGQIEADRAAGKTVWDAVVSGSSMRFR 959
               LL    P GF+A+LG L+L GM+ KN ++L+ QIE +  +GK  + AVV  S  R R
Sbjct: 920  TTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRVR 979

Query: 960  PIMLTAVSTVLGMIPIAPTVFWGPMAFAIMGGLLVGTLLTLIFLPALY 1007
            P+ + AV+T+LGMIP+ P +F+ PMA  IM GL   T+LTLI +P LY
Sbjct: 980  PVCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLY 1027