Pairwise Alignments

Query, 1029 a.a., Multidrug resistance protein MdtC from Xanthobacter sp. DMC5

Subject, 1036 a.a., Cation/multidrug efflux protein from Sinorhizobium meliloti 1021

 Score =  733 bits (1893), Expect = 0.0
 Identities = 411/1042 (39%), Positives = 609/1042 (58%), Gaps = 29/1042 (2%)

Query: 5    FNLSAWALKHRSVIIYLMAISVVAGVMAFRNLGRAEDPTFVIKTMVVQANWPGATLEETF 64
            FNLSA A++ R+V ++ + +   AGV AF +LGRAEDP+F IKT+ V   WPGAT  E  
Sbjct: 3    FNLSALAVRERAVTLFFIVLLAAAGVYAFMSLGRAEDPSFTIKTLTVTTVWPGATAREMQ 62

Query: 65   RQVTERLERKLQETPQLNFLESYTKPGVTTVFVHLKGSATAAEVPDIWYHVRKSIADIRH 124
              V E LE+++QE    + +E+ T+PG   + V LK S     V + +Y  RK + D   
Sbjct: 63   DLVAEPLEKRIQELTWYDRVETTTRPGYAFLTVTLKDSTPPTAVEEEFYQARKKLGDEAR 122

Query: 125  TLPQGIVGPFFNDEFGDTFGIIYGFTADGFSHRELRDYVEEARSELLHVPDVSKIEILGA 184
             LP G+ GPF NDE+ D    +Y   A G   REL    E  R +LLHVP V KI ILG 
Sbjct: 123  NLPSGVFGPFVNDEYSDVSFALYALKAKGMPMRELVRQAEVIRQDLLHVPGVKKINILGE 182

Query: 185  QDERIFIEFSMQELASLGIDRQAVLSALAAQNIVRPSGEIQTGKENISIRVSGAFASEAD 244
            + E+IF+EFS  +LA+LGI  Q + +AL  QN V P+G I T    + IR  GA+ S   
Sbjct: 183  RPEQIFVEFSYAKLATLGISAQDIAAALQRQNTVTPAGSIDTRGPQVFIRFDGAYNSVQA 242

Query: 245  IANVNLAVNGRLIRLADIATIRRGFADPPQPMFRVNGKDAIGLAIAMRDGGDILAMGANI 304
            IA   +   GR ++L+D A +RRG+ DP   + R  G+ AI L   M+ G + L +G  +
Sbjct: 243  IAATPIVAAGRTLKLSDFAEVRRGYEDPATYIIRHEGEPAIMLGAVMQQGWNGLELGKAL 302

Query: 305  DRAMTRILANMPVGIDATLVADQAVTVKSAISEFMESLWQAVGIILVVSFIALGVRAGAI 364
            +     I   +P+G+    V+DQAV + +A+ EFM     A+G++L+VS ++LG R G +
Sbjct: 303  EERSAAIARTLPLGMTLAKVSDQAVNIDAAVGEFMLKFAMALGVVLLVSLLSLGWRVGIV 362

Query: 365  VALAIPLTLAIVFALMQLAHIDMQRISLGALIIALALMVDDAMTTTDATLTRLAAGDDPP 424
            VALA+PLTLA+VF +M        RI+LGALI+AL L+VDDA+   +  + ++  G D  
Sbjct: 363  VALAVPLTLAVVFLIMLETGRFFDRITLGALILALGLLVDDAIIAIEVMVVKMEEGMDRI 422

Query: 425  TAASYAFKAYAAAMLAGTLVTVAGFVPVGFAASSAGEYTFTLFAVVAIALLVSWIVAVLF 484
             AA+YA+   AA ML+GTLVT+ G +PVGFA S+AGEY   +F VV  AL+VSW+VAV+F
Sbjct: 423  KAAAYAWSHTAAPMLSGTLVTIIGLMPVGFARSTAGEYAGNIFWVVGFALIVSWVVAVIF 482

Query: 485  APLLQVLILRAPAKDKIPDPNAPPKGVMGMY--------RAFLILCLRLRWVTLAVTAGL 536
             P L V +L        PD      G   +Y        R  +   +R ++VT AV   +
Sbjct: 483  TPYLGVKML--------PDIKPVEGGHHAIYDTPNYRRLRGIIEFAVRHKYVTCAVVGIV 534

Query: 537  FVLSVLALPLIPRQFFPSSDRPELLVDLASPQNASIYASQSVAEAFDKVLANDPDVARWS 596
              LSV+ +  +  QFFP+SDRPE+LV++  P+ ASI  + +  E  ++ L   P+    +
Sbjct: 535  MALSVVGMGGVKHQFFPTSDRPEVLVEVRMPEGASIETTIATVEKLERWLQEQPEADILT 594

Query: 597  TYVGRGAIRFYLPLDVQLPNDFFAQSVIVAKDVAARERLRVKLEKVLATDF-PQLVARIS 655
            +Y+G+GA RF+  +  +LP+  FA+ V++  D  ARE L+++L   ++    P+   R++
Sbjct: 595  SYIGQGAPRFFFAMAPELPDPAFAKIVVLTPDSHAREALKLRLRAAVSDGLVPEGYVRVT 654

Query: 656  PLELGPPVGWPVQYRVSGPEIEKVRAIAFDLAKVMAENPQVETVNYNWIEPARQVSIRVD 715
             L  GP   +PV++R+ GP+  ++  I+    ++M   P V   N +W      +    D
Sbjct: 655  QLVFGPYTPFPVEFRIMGPDPAQLYQISEKALEIMKGVPDVRQANRDWGNRTPVLRFVPD 714

Query: 716  QDEARLLGLSTAQLAGVLNTVLSGQPVTQVRDDIYLVNVVARATDEERVSLSSLATLQVP 775
            QD   L+GLS A+ A  +  +LSG PVTQVR++I  V VVAR+  E R+  + LA   + 
Sbjct: 715  QDRLNLIGLSPAEAAQQMQLLLSGIPVTQVRENIRNVPVVARSAGESRLDPARLADFSLM 774

Query: 776  LPGGRTVPLSQIATFEYGQDYPAIWRRDRVPTLTVQSDVKRGVLPESVVEKLDPKIEALR 835
               GR VPL QI   E   + P + RRDR P +T++SD+     P  V +++   ++ L 
Sbjct: 775  SRDGRQVPLDQIGHSEIRFEEPILKRRDRTPVITIRSDINEATQPPEVSQQIMTALQPLI 834

Query: 836  RTLPAGYAITTGGTVEESASSLASVVAVVPVMLLLMFTVLMFELKSFQRLVIVLSVAPLG 895
             +LP GY I  GG +EES  +  ++V + P M+  M  V++ +++S   + +V+  APLG
Sbjct: 835  ASLPVGYRIEMGGNIEESLKANVALVKIFPAMIAAMLIVIILQVRSLSTMTMVMLTAPLG 894

Query: 896  LIGVVGALLLSGRPLGFVAILGVLALIGMITKNAVILIGQIEADRAAGKTVWDAVVSGSS 955
            L GVV  LLL  +P GF AILG++ L G++ +N +IL  QI+ ++AAG   + AV+  + 
Sbjct: 895  LAGVVPVLLLFNQPFGFNAILGLIGLAGILMRNTLILTEQIKENKAAGLHDYHAVIEATV 954

Query: 956  MRFRPIMLTAVSTVLGMIPIAPTVFWGPMAFAIMGGLLVGTLLTLIFLPALYVAWF---- 1011
             R RP++LTA++ VL  +P+  +VFWG MA+ ++GG  VGT++ L+FLPALY AWF    
Sbjct: 955  QRTRPVILTALAAVLAFVPLTHSVFWGSMAYTLIGGTAVGTVMILLFLPALYAAWFRIKP 1014

Query: 1012 -------GPDTGPE-RVAGAGK 1025
                    P  GPE R+A A +
Sbjct: 1015 TADDTHEEPTEGPELRIAMAAE 1036