Pairwise Alignments

Query, 1029 a.a., Multidrug resistance protein MdtC from Xanthobacter sp. DMC5

Subject, 1014 a.a., integral membrane protein, AcrB/AcrD/AcrF family from Phaeobacter inhibens DSM 17395

 Score =  535 bits (1378), Expect = e-156
 Identities = 323/1005 (32%), Positives = 524/1005 (52%), Gaps = 9/1005 (0%)

Query: 21   LMAISVVAGVMAFRNLGRAEDPTFVIKTMVVQANWPGATLEETFRQVTERLERKLQETPQ 80
            +M  ++  G+  F NLGR EDP F IK  VV   +PGA+ E+   +V+E LE  +Q+  +
Sbjct: 17   IMLAALFGGIWGFLNLGRLEDPAFTIKQAVVITQYPGASAEQVALEVSEPLESAIQKMGE 76

Query: 81   LNFLESYTKPGVTTVFVHLKGSATAAEVPDIWYHVRKSIADIRHTLPQGIVGPFFNDEFG 140
            +  + S  +PG++ + V ++ +   +E+P +W  +R  I D    LP+G+  PF ND FG
Sbjct: 77   VKQITSMNQPGLSRIDVEMQDTFDGSELPALWTKLRSEIEDAARDLPEGVSTPFVNDGFG 136

Query: 141  DTFGIIYGFTADGFSHRELRDYVEEARSELLHVPDVSKIEILGAQDERIFIEFSMQELAS 200
            D FG+ Y  TA+G++  E  +     R ELL V  V+ +EI G  +E IF+E  M    +
Sbjct: 137  DVFGVFYAVTAEGYTDAERHELATFLRRELLAVDGVADVEIAGLPEEAIFVEPKMAITVN 196

Query: 201  LGIDRQAVLSALAAQNIVRPSGEIQTGKENISIRVSGAFASEADIANVNLAVNGRLIRLA 260
              I   AV +ALA  N VR +G++  G     +       S  +IA + +   G +I + 
Sbjct: 197  QNIPIDAVSNALATANSVRSAGQVDNGPVQTRVSAPEGSDSVTEIAGLTIGSQGEVINII 256

Query: 261  DIATIRRGFADPPQPMFRVNGKDAIGLAIAMRDGGDILAMGANIDRAMTRILANMPVGID 320
            D+A + RG  D P  + R +G +A  + IA     +I+ +G  +D  +  + + +P G++
Sbjct: 257  DMADVHRGRVDDPSQIIRFDGVEAFTIGIAGLATENIVEVGQRVDARLAELDSQIPYGVE 316

Query: 321  ATLVADQAVTVKSAISEFMESLWQAVGIILVVSFIALGVRAGAIVALAIPLTLAIVFALM 380
               +  Q V V  A ++F+ +L  +VGI+++V  I +G RA  +V   + LT+      M
Sbjct: 317  LKPIYQQHVVVDQASNDFLVNLAMSVGIVVIVLAIFMGWRAAIVVGTTLLLTVVGTLMFM 376

Query: 381  QLAHIDMQRISLGALIIALALMVDDAMTTTDATLTRLAAGDDPPTAASYAFKAYAAAMLA 440
                I+M+RISLGALIIA+ ++VD+A+   +     +A G     AA  A       +L 
Sbjct: 377  NFFSIEMERISLGALIIAMGMLVDNAIVVAEGMQISMARGRSSREAAHEAAAKTQIPLLG 436

Query: 441  GTLVTVAGFVPVGFAASSAGEYTFTLFAVVAIALLVSWIVAVLFAPLLQVLILRAPAKDK 500
             T++ +  F  +G +  S GE+ F+LFAV+ I+LL+SW++A+   PLL     +  + D 
Sbjct: 437  ATVIGIMAFAGIGLSPDSTGEFMFSLFAVIGISLLLSWLLALTATPLLAHYFFKQGSGD- 495

Query: 501  IPDPNAPPKGVMGMYRAFLILCLRLRWVTLAVTAGLFVLSVLALPLIPRQFFPSSDRPEL 560
              D +A    +   Y   L L L+LRW  +     + VL  +    + +QFFP+S+ P  
Sbjct: 496  --DHDAYSGILFRTYSKILRLSLKLRWFVVPGLIAITVLCFIGFGQVKQQFFPNSNTPLF 553

Query: 561  LVDLASPQNASIYASQSVAEAFDKVLANDPDVARWSTYVGRGAIRFYLPLDVQLPNDFFA 620
             V    PQ +SI  +      F++ LA+  DV   +T+VG+GA RF L  D + P   + 
Sbjct: 554  FVHYKLPQGSSITTTSEHMRVFEEWLADRNDVETVTTFVGQGATRFMLTYDSEDPTPSYG 613

Query: 621  QSVIVAKDVAARERLRVKLEKVLATDFPQLVARISPLELGPPVGWPVQYRVSGPEIEKVR 680
              +I A  + A   L+  LE      FP+   R   L  GP  G P++ R +GP+   +R
Sbjct: 614  HLIIRATSLEAIPALQADLEVFGQGRFPEGEFRTKRLVFGPGGGAPIEVRFAGPDPRVLR 673

Query: 681  AIAFD-LAKVMAENPQVETVNYNWIEPARQVSIRVDQDEARLLGLSTAQLAGVLNTVLSG 739
             +  + + ++    P + +V  +W E    +      D A+  G++   +A  L     G
Sbjct: 674  QLGEEAMLRLQQATPDILSVRQDWREQEITLKPIYATDRAQTAGVTREAIADALQFSTDG 733

Query: 740  QPVTQVRDDIYLVNVVARATDEERVSLSSLATLQVPLPGGRTVPLSQ-IATFEYGQDYPA 798
                  R+   L+ +V R  +    +L  +  L      G+ VPL Q +   +   +   
Sbjct: 734  LRAGVFRERDRLIPIVLRRAEAGEYNL--MDQLVFSEAAGKFVPLEQMVGGIDVVVENTL 791

Query: 799  IWRRDRVPTLTVQSDVKRGVLPESVVEKLDPKIEALRRTLPAGYAITTGGTVEESASSLA 858
            + RRDRVPTLTV +D+   +   SV  ++   IE ++  LPAGY +  GG  E SA + A
Sbjct: 792  VHRRDRVPTLTVGADISADLTAASVFSQVQDTIEEIQ--LPAGYTMEWGGEHENSADANA 849

Query: 859  SVVAVVPVMLLLMFTVLMFELKSFQRLVIVLSVAPLGLIGVVGALLLSGRPLGFVAILGV 918
            S+   +PV +L+M  + +    + ++ +I+  + P+ + GVV  LL +G P  F A+LG+
Sbjct: 850  SLGKQLPVTILIMVLISVLLFNAIRQPIIIWLLVPMSVNGVVIGLLGTGMPFTFTALLGL 909

Query: 919  LALIGMITKNAVILIGQIEADRAAGKTVWDAVVSGSSMRFRPIMLTAVSTVLGMIPIAPT 978
            L+L GM+ KN ++L+ +I+  RA G+ + +A+V  S  R RP+ML AV+T+LGM P+   
Sbjct: 910  LSLSGMLIKNGIVLVEEIDLVRAEGRPLREAIVEASVSRLRPVMLAAVTTILGMAPLLTD 969

Query: 979  VFWGPMAFAIMGGLLVGTLLTLIFLPALYVAWFGPDTGPERVAGA 1023
             F+  MA  IMGGL   T+LTL+  P  Y+ +FG D   E+ A A
Sbjct: 970  AFFVSMAITIMGGLAFATVLTLVAAPVFYLIFFGRDEKREQAATA 1014