Pairwise Alignments

Query, 468 a.a., Sialic acid TRAP transporter large permease protein SiaM from Xanthobacter sp. DMC5

Subject, 426 a.a., TRAP dicarboxylate transporter, DctM subunit from Pseudomonas syringae pv. syringae B728a

 Score =  292 bits (748), Expect = 1e-83
 Identities = 160/462 (34%), Positives = 260/462 (56%), Gaps = 45/462 (9%)

Query: 2   WLLIGGFLFLMLCGVPVAIAMAGASLVYILVSGTVPDVVIAQRMIAGVESFPLLAVPFFI 61
           ++L+G F+ L+L G+PVA A+  ++L+         D ++ Q +  GV  F LLA+PFF+
Sbjct: 4   FILLGSFIALILIGMPVAYALGLSALIGAWWIDIPADALMIQ-IAGGVNKFSLLAIPFFV 62

Query: 62  LAGNLMNIAGVTGRIYAFAVALVGWMRGGLGQVNIIGSVIFSGMSGTAIADAAGLGTIEI 121
           LAG +M   G++ R+ AFA  LVG++RGGL  VNI+ S  F  +SG+++AD A +G++ I
Sbjct: 63  LAGAIMAEGGMSRRLVAFAAVLVGFVRGGLSLVNIVASTFFGAISGSSVADTASVGSVLI 122

Query: 122 KAMKDHGYSTEFAVGVTAASATLGPIIPPSLPFVIYGMLAN--VSIGALFLGGVVPGVVM 179
             M+ +GY  +F+  VT + +    + PPS   V+Y + A   VSI +LF+ G++PG+++
Sbjct: 123 PEMERNGYPRDFSTAVTVSGSVQALLTPPSHNSVLYSLAAGGTVSIASLFMAGILPGLLL 182

Query: 180 TLLMMGTVAYFAHRNGWGSDAAFNWRQLLSASIEVVIVLAFPAAVYVMIEVGLSTNQAVL 239
           + +MMG    FA +  +        RQ L  + E                          
Sbjct: 183 SAVMMGLCMIFARKRNYPKGEVVPLRQALKIAGE-------------------------- 216

Query: 240 IALAVLIALDWYFDFSAVMALMTPVILIGGMTLGWFTPTEAAVAAVIWSLFLGLVRYRSM 299
                           A+  +M  VI++GG+  G FT TE+A  AV+W+ F+ +  YR  
Sbjct: 217 ----------------ALWGMMAMVIILGGILSGIFTATESAAIAVLWAFFVTMFIYRDY 260

Query: 300 TLKTLAKATFDTIETTASVLFIVTAASIFAWLLTASQAAQMLSDAILGFTQNKWVFLALA 359
             + L K       T + V+ ++  A+ F ++LT  +    ++ A L  + N++V L   
Sbjct: 261 KWRDLPKLMHRAARTISIVMILIGFAASFGYILTLMEIPMKITTAFLTLSDNRYVILMCI 320

Query: 360 NLLILFVGCFIDTIAAITILVPILLPIVLKLGIDPIHFGLIMTLNLMIGLLHPPLGMVLF 419
           N+++L +G  +D    I IL PILLP+++ +GIDP+HFG+IM +NL IGL+ PP+G VLF
Sbjct: 321 NVMLLLLGTVMDMAPLILILTPILLPVIVGVGIDPVHFGMIMLVNLGIGLITPPVGAVLF 380

Query: 420 VLARVARLSVERTTMAILPWLVPLMIALLAITYIPGLTLWLP 461
           V A V ++++E T  A++P+ V L + L+ +TYIP ++LWLP
Sbjct: 381 VGAAVGKVTIEATVKALVPFYVALFLVLMLVTYIPAISLWLP 422