Pairwise Alignments

Query, 468 a.a., Sialic acid TRAP transporter large permease protein SiaM from Xanthobacter sp. DMC5

Subject, 429 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score =  273 bits (697), Expect = 1e-77
 Identities = 161/466 (34%), Positives = 250/466 (53%), Gaps = 43/466 (9%)

Query: 2   WLLIGGFLFLMLCGVPVAIAMAGASLVYILVSGTVPDVVIAQRMIAGVESFPLLAVPFFI 61
           WLL   F  LML GVP+  AM  A L  +   G +  + +   +  G+  +PLLA+P F+
Sbjct: 3   WLLFLSFFALMLLGVPLGTAMGLAGLAVVFF-GDLGLMSLPTSVYTGIAKYPLLAIPVFV 61

Query: 62  LAGNLMNIAGVTGRIYAFAVALVGWMRGGLGQVNIIGSVIFSGMSGTAIADAAGLGTIEI 121
           LAG +   +GV  R+  FAVALVG  RGGL    I+  ++  G+SG+  ADAA + T+ I
Sbjct: 62  LAGMIFERSGVALRLVRFAVALVGQRRGGLALAAILVCMVLGGISGSGPADAAAVATVMI 121

Query: 122 KAMKDHGYSTEFAVGVTAASATLGPIIPPSLPFVIYGMLA-NVSIGALFLGGVVPGVVMT 180
            +M   GY   F+  V AA+ +   +IPPS+ F++Y +L    S+ ALF  G++PG++  
Sbjct: 122 PSMARAGYPAAFSASVIAAAGSTAILIPPSIVFILYSVLVPQASVPALFAAGLIPGLLAG 181

Query: 181 LLMMGTVAYFAHRNGWGSDAAFNWRQLLSASIEVVIVLAFPAAVYVMIEVGLSTNQAVLI 240
           L +M    + + R+G+G                                 GL   +A   
Sbjct: 182 LALMLPAWWLSVRHGFGV-------------------------------AGLQDGEARQS 210

Query: 241 ALAVLIALDWYFDFSAVMALMTPVILIGGMTLGWFTPTEAAVAAVIWSLFLGLVRYRSMT 300
             + L    W         L+ PVI++GGM  G FTPTEAAV AV + LF+GLV YR++ 
Sbjct: 211 FWSALKEASW--------GLLAPVIILGGMRSGAFTPTEAAVVAVFYGLFVGLVIYRTLN 262

Query: 301 LKTLAKATFDTIETTASVLFIVTAASIFAWLLTASQAAQMLSDAILGFTQNKWVFLALAN 360
            K + +   ++ E +A V+ I+  AS+FAW  +     + L   ++G + N+   L    
Sbjct: 263 WKNIYEVLVESAEVSAVVMLIIALASVFAWAGSTLGTFEALGGWLVGLSGNETAILLAVT 322

Query: 361 LLILFVGCFIDTIAAITILVPILLPIVLKLGIDPIHFGLIMTLNLMIGLLHPPLGMVLFV 420
           LL+L  G F+D ++ + I +P LLP++L  G DP+ FG+I+T+N+ IG   PP+ + L V
Sbjct: 323 LLLLIAGMFLDAVSILFIFMPFLLPVILHFGWDPVWFGVILTMNVAIGQFTPPMAINLMV 382

Query: 421 LARVARLSVERTTMAILPWLVPLMI-ALLAITYIPGLTLWLPHAMG 465
            +R+A + +E T   +L W+V  M+ ALL +T++P L   +P  +G
Sbjct: 383 TSRIAGIRIEDTVPWVL-WMVGAMLSALLLVTFVPELATGIPRYLG 427