Pairwise Alignments

Query, 278 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 407 a.a., proline/arginine ABC transporter, permease component (from data) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  146 bits (368), Expect = 8e-40
 Identities = 89/283 (31%), Positives = 141/283 (49%), Gaps = 21/283 (7%)

Query: 1   MSGYLTGVLVVLAFNVIAAYAVYLPLA-AGQLNLGIAGFMAIGAYASAFLTNEYMWPMWA 59
           +S Y T +++     V+    + + +  +GQL LG   F A+GAYA A L  ++    W 
Sbjct: 107 VSTYQTNIMISALLYVMLGLGLNIVVGLSGQLVLGYVAFYAVGAYAYALLNADFGLGFWT 166

Query: 60  AIPLGAGLAGLVGLLIGVPVLRTHGIYLAMATFALGQVISAIFLNL-EVVGGAAGYPVTD 118
            +P+G  LA + G+L+G PVLR  G YLA+ T   G+++  +  N   V  G +G  ++ 
Sbjct: 167 VLPIGGALAAVFGILLGFPVLRLKGDYLAIVTLGFGEIVRLVLENWGSVTRGPSG--ISK 224

Query: 119 YAGP--------------YVVYAAAAGVVVLMLLVSR---TRFALCLTAVKSDATVADLL 161
            A P              Y+ Y   A V+  +  V R   +R      A++ D    + +
Sbjct: 225 IARPGLFGMELSVSEATTYIYYLILAAVIFTIFAVGRLKDSRIGRAWQALREDEIACEAM 284

Query: 162 GVSVRGMKVAAFALGAAVAGFGGGLYAHHYSFVEAQHFNVLLSVFTVLYVLFGGTQTVWG 221
           G+ +   K+ AFALGA  AGF G ++A   +F+    F  L S   +  V+ GG  +  G
Sbjct: 285 GIDLTTTKLTAFALGACWAGFAGVIFAAKTTFINPASFTFLESAMILAMVVLGGMGSTLG 344

Query: 222 PLVGAAFFTLVPELLRASDQWRYALFAVFIILFMAVRPQGLVT 264
            ++GA    L+PE LRA  ++R  +F   ++L M  RPQGLV+
Sbjct: 345 VVLGALVLILLPEYLRAFSEYRMLIFGAAMVLMMVFRPQGLVS 387