Pairwise Alignments

Query, 329 a.a., Sialic acid-binding periplasmic protein SiaP from Xanthobacter sp. DMC5

Subject, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 90.5 bits (223), Expect = 5e-23
 Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 8   LAAALALAAAFTLGGPAS-AQTKLKWAHVYEPSE-PFHTASVWAAGEIAKRTNGRYQIDV 65
           +AA++    +F         +  +K++HV    + P   A+      + +  NG+  + V
Sbjct: 8   IAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQV 67

Query: 66  YPSSQLGKESDINQGLTLGTVDMIISGSSFAGKAYPPIGVTYYPYTFRDAGHLLAYAKSD 125
           +P+S L  +  + + L  G V +     S   K      +   P+ F D   +      D
Sbjct: 68  FPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAV------D 121

Query: 126 VFKDLAKGYEDK---TGNHIVAVTYY--GVRQSTSNKPFKTCAEMKGLKIRVPDAPAYLA 180
            F+  AKG E K   T   +  + ++  G++Q ++NKP    A+ KGLK RV  +   +A
Sbjct: 122 RFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASDVLVA 181

Query: 181 MPKACGANITPIAFAEVYLALQNGTVDAQENPLTTIEAKKFYEVQKNIVLTGH-IVDHLN 239
             +  GAN   ++FAE Y  LQ   +D QEN  + I  +K++EVQ     T H I+D+L 
Sbjct: 182 QFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYL- 240

Query: 240 TIISGSLWKKLSPED-----QKIFTEVTQEAAAKA 269
            +++ S W    P D      KI  EVT E  A++
Sbjct: 241 -VVTSSKWWDGLPADVRDQFAKILNEVTIERNAES 274