Pairwise Alignments

Query, 329 a.a., Sialic acid-binding periplasmic protein SiaP from Xanthobacter sp. DMC5

Subject, 330 a.a., substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  141 bits (356), Expect = 2e-38
 Identities = 101/306 (33%), Positives = 149/306 (48%), Gaps = 10/306 (3%)

Query: 5   RRGLAAALALAAAFTLGGPASAQTKLKWAHVYEPSEPFHTASVWAAGEIAKRTNGRYQID 64
           + G  A   L AA  L G ASA T+L++AHV    +     +  AA  IA  T G   + 
Sbjct: 6   KHGRVAGAMLGAAL-LAGAASA-TELRYAHVGAEGDIQTVYAAQAAEGIAAATGGEVTVT 63

Query: 65  VYPSSQLGKESDINQGLTLGTVDMIISGSSFAGKAYPPIGVTYYPYTFRDAGHLLAYAKS 124
           VYP+SQLG  +++  G+ +G++ M     +   +  P + V   P+ +RD  H LA A  
Sbjct: 64  VYPASQLGGVAEMVDGVRMGSISMGHHDFASLARLVPEVAVFNAPFIYRDGAHALA-ATD 122

Query: 125 DVFKDLAKGYEDKT---GNHIVAVTYYGVRQSTSNKPFKTCAEMKGLKIRVPDAPAYLAM 181
                  +   +K    G  IV   Y G R  +SN P KT A++ G   R      +++M
Sbjct: 123 PQSSPALQAINEKLIAQGVRIVGRIYRGDRHISSNFPVKTPADLAGKPFRAVPLELWVSM 182

Query: 182 PKACGANITPIAFAEVYLALQNGTVDAQENPLTTIEAKKFYEVQKNIVLTGHIVDHLNTI 241
            K  GA  TP+  AE+  AL  G V  QENPLT I +    EVQ ++ +TGH+   L   
Sbjct: 183 VKGFGAIPTPVEVAELPTALMTGVVVGQENPLTRIASNNLNEVQSHLSMTGHMRAVLAVF 242

Query: 242 ISGSLWKKLSPEDQKIFTEVTQEAAAKATAEVAQREKELLDIFKQKGLTVVE----VDTD 297
           I+  +W+ LS E +   T+V  E A K+     + E +L+   K +G+TV+     +D  
Sbjct: 243 INEEVWQGLSEEQRTALTKVLDEEAQKSLKMATESEADLVKELKGRGMTVITEAEGLDVA 302

Query: 298 DFRNTV 303
            FR  V
Sbjct: 303 AFREKV 308