Pairwise Alignments

Query, 329 a.a., Sialic acid-binding periplasmic protein SiaP from Xanthobacter sp. DMC5

Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021

 Score = 99.8 bits (247), Expect = 9e-26
 Identities = 75/298 (25%), Positives = 127/298 (42%), Gaps = 4/298 (1%)

Query: 5   RRGLAAALALAAAFTLGGPASAQTK----LKWAHVYEPSEPFHTASVWAAGEIAKRTNGR 60
           RR     +A  AA +L  P+  + +    L+   V  P  P++ A++     +   TNGR
Sbjct: 5   RRTFLGGVAAGAALSLATPSLVRAQETRTLRLGIVTPPGHPWNNAALKVGEALKAETNGR 64

Query: 61  YQIDVYPSSQLGKESDINQGLTLGTVDMIISGSSFAGKAYPPIGVTYYPYTFRDAGHLLA 120
             I V+P+ QLG E+ + Q +  G +D+    ++  G   P +     P+       +  
Sbjct: 65  LSISVFPAGQLGNEAAMLQQMQSGALDLGWIMTAELGSRIPAVAAINAPWVVDSTAKVAK 124

Query: 121 YAKSDVFKDLAKGYEDKTGNHIVAVTYYGVRQSTSNKPFKTCAEMKGLKIRVPDAPAYLA 180
             +  V   L      +TG   +A     +R   S K      ++ G+K+R+   PAY  
Sbjct: 125 LVREPVAMKLLDVLPAETGTVGLAWGITTMRVVFSAKEIAGLDDINGMKLRINTTPAYRD 184

Query: 181 MPKACGANITPIAFAEVYLALQNGTVDAQENPLTTIEAKKFYEVQKNIVLTGHIVDHLNT 240
             +  GA  TPI    V+ A+ NG VD  E  L     ++F +V K ++    I      
Sbjct: 185 FYQLLGAAPTPIPTPAVFDAMSNGQVDGLEADLDFSWNQRFDKVSKTMLKMNAIFMPCVA 244

Query: 241 IISGSLWKKLSPEDQKIFTEVTQEAAAKATAEVAQREKELLDIFKQKGLTVVEVDTDD 298
           + SG +W+ L   D++I   +T+ A  +        E  LL+ F   G+ + +V   D
Sbjct: 245 LASGRVWQTLPEADREIIARLTKSALDEQIDATVANEPALLEKFAGAGIPIKDVTVAD 302