Pairwise Alignments

Query, 258 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 352 a.a., Outer membrane protein romA from Pseudomonas fluorescens FW300-N2E2

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 24/220 (10%)

Query: 11  IGGPTVLIEIGGFRLLTDPTFDPPGLYRTEPVRF---EKTAGPALAVEQVLPLDAVLLSH 67
           +G  TVL+++     LTDP F      R  PV++   ++   P +++E++ P++AV+LSH
Sbjct: 80  LGHSTVLLKLRDKFWLTDPVFSE----RASPVQWVGPKRFHQPPISLEELPPIEAVILSH 135

Query: 68  DQHLDNLDASGRALLPQARAVFTTPVAAARLGGNAV--GLAPFETREI------EVPGKG 119
           D H D+LD      L      F  P+    +G   +  G+   + R++      EV G  
Sbjct: 136 D-HYDHLDHQAILKLAAKTRHFLAPLG---VGDTLIKWGIDASKVRQLDWWQGTEVDG-- 189

Query: 120 RLLVTGAPARH-GPPGIEPISGDVVGLLIGVEAPGDAVYVTGDTVWYEGVAEVARRFSPK 178
            +     P++H    G+   +G +    + ++A G  ++ +GDT +++G   +  ++ P 
Sbjct: 190 -IEFIATPSQHFSGRGLFDSNGTLWASWVMIDA-GTRIFFSGDTGYFDGFKRIGEQYGPF 247

Query: 179 VVVVFAGSAQPRGAFHMTMDANDALETARAFPGATLFAAH 218
            + +    A      H+ M     L+      G  L   H
Sbjct: 248 DLTLMETGAYNVDWPHVHMQPEQTLQAHIDLKGRWLLPIH 287