Pairwise Alignments

Query, 436 a.a., N-acetylmuramoyl-L-alanine amidase AmiC from Xanthobacter sp. DMC5

Subject, 471 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas syringae pv. syringae B728a

 Score =  197 bits (501), Expect = 6e-55
 Identities = 137/388 (35%), Positives = 202/388 (52%), Gaps = 18/388 (4%)

Query: 49  ALAPALAREARLAGDAKRTRLIVDLDRAPAFRAFTLANPPRVILDLSDVTFALKPDAGQL 108
           A+A    R  RL      TRL+ DL        FTL +P R+++D++  T    P     
Sbjct: 21  AVAATQVRSVRLWRAPDNTRLVFDLTGPVQHSLFTLTSPDRLVIDINGATLG-GPLNVPT 79

Query: 109 RRGLVTAYRFGVFAPGKARMVLEVSGPVAIDKAFVLDAVDDQPARLVVDLVKADADAFAR 168
               +++ R     P   R+V+++   V   K+F L        RLVVDL    ADA   
Sbjct: 80  ANTPISSMRSAQRTPTDLRVVIDLKKGVT-PKSFTLAPNQQYGNRLVVDLYDNAADANPT 138

Query: 169 SIATEAEQRTALPAAAVAAP---------PAGDTRPVIVIDPGHGGIDSGTSGYSAFVEK 219
            +  +    TA PA  V+           P G    V+VID GHGG D G SG +   EK
Sbjct: 139 PVIPDTAANTA-PAVPVSPAKPEIKLTPVPNGKRDIVVVIDAGHGGEDPGASGGAGQKEK 197

Query: 220 TIVLETALALRERLEKAGGYRVVLTRSTDTFIPLADRVRIARTNRADLFISIHADALARG 279
            +VL  A  L+ ++    GYR  LTR+ D FIPL  R  IAR+  ADLF+SIHADA    
Sbjct: 198 NVVLSIARELQRQVNAEKGYRAELTRTGDYFIPLRKRTEIARSKGADLFVSIHADAAP-- 255

Query: 280 DGRARGASVYTLSETASDTESAH-LADKENKADLIAG---VDLSDETDEVAGILVDLAQR 335
              A GASV+ LS+  + +E+A  LAD EN++DLI G   V L D+   +AG+L+DL+  
Sbjct: 256 SSAAFGASVFALSDRGATSETARWLADSENRSDLIGGAGAVSLDDKDRMLAGVLLDLSMT 315

Query: 336 ETRNFSALFARTLVGSMKAATRMHGTPLKSAGFRVLRAHDVPSVLVELGYMSSPDDLKQL 395
            + + S    + ++ ++   T +H   ++ AGF VL++ D+PS+LVE G++S+ ++  +L
Sbjct: 316 ASLSSSLNVGQKVLSNIGRVTSLHKARVEQAGFMVLKSPDIPSILVETGFISNANEANKL 375

Query: 396 TSEAGRDRMADAIAAGVTQFFAHKGAAG 423
            S + +  +A +I +GV QFF      G
Sbjct: 376 GSASHQQALARSITSGVKQFFQQNPPQG 403