Pairwise Alignments

Query, 370 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 68/252 (26%), Positives = 106/252 (42%), Gaps = 13/252 (5%)

Query: 34  ALGLTSP--VRAKD-EPIRLQVVGGLGGVTQFTRLEQPFWEREITERTGGRVVATIIPND 90
           AL L +P  VRA++   +RL +V   G       L+       +   T GR+  ++ P  
Sbjct: 17  ALSLATPSLVRAQETRTLRLGIVTPPGHPWNNAALKVG---EALKAETNGRLSISVFP-- 71

Query: 91  SGGLRGQE--MLQLMQLGVVPFGTGLLSVVSAEEPELNAVDLPILNPDMATLKKTVTA-F 147
             G  G E  MLQ MQ G +  G  + + + +  P + A++ P +    A + K V    
Sbjct: 72  -AGQLGNEAAMLQQMQSGALDLGWIMTAELGSRIPAVAAINAPWVVDSTAKVAKLVREPV 130

Query: 148 RVHLINILRDRWDIELLAIYAYPAQVLFCRSAFRGLDDIAGRRVRTSSV-AQSDLMKALG 206
            + L+++L        LA      +V+F      GLDDI G ++R ++  A  D  + LG
Sbjct: 131 AMKLLDVLPAETGTVGLAWGITTMRVVFSAKEIAGLDDINGMKLRINTTPAYRDFYQLLG 190

Query: 207 AIPVVVPFADVVDAVRQGVVDCAITGTLSGYEIGLGDVTTHVHSMAISWGLSFFGANVNA 266
           A P  +P   V DA+  G VD         +      V+  +  M   +      A+   
Sbjct: 191 AAPTPIPTPAVFDAMSNGQVDGLEADLDFSWNQRFDKVSKTMLKMNAIFMPCVALASGRV 250

Query: 267 WQALPTDVREQI 278
           WQ LP   RE I
Sbjct: 251 WQTLPEADREII 262