Pairwise Alignments

Query, 1095 a.a., Ribonuclease E from Xanthobacter sp. DMC5

Subject, 489 a.a., ribonuclease E/G from Vibrio cholerae E7946 ATCC 55056

 Score =  224 bits (571), Expect = 1e-62
 Identities = 127/374 (33%), Positives = 200/374 (53%), Gaps = 2/374 (0%)

Query: 373 IQEVIRRRQVMLVQVVKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITNAVDR 432
           I E++R+ Q ++VQVVK+  G KGA LTT ++L  RY V MP  +  G +S++I +  +R
Sbjct: 93  ISELVRQGQDIVVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVG-VSQRIESEAER 151

Query: 433 KRLKEVVQDLEVPEGMGIILRTAGANRTKTEIKRDFEYLLRLWETVREMTLSSTAPSLVY 492
           +RLK++V       G G I+RTA     + E+ +D  +L RLW  V E        S++Y
Sbjct: 152 ERLKKIVSHYCDEHG-GFIIRTAAEGANEKELTQDAAFLKRLWSKVIERRSKYKNRSMLY 210

Query: 493 EEGSLIKRAIRDLYNKDIDDIHVAGEEGFREARDFMRMLMPSHAKSVMPYREPQPIFARY 552
            E  L +R +RD    ++  I +   + F   ++F    +P     +  Y   +PIF  Y
Sbjct: 211 GELGLAQRILRDFVGTELTKILIDSRQEFENLKEFTSEYVPELTAKLELYHGDKPIFDMY 270

Query: 553 GVEQQLDAMFSPVVQLKSGGYIVINPTEALVSIDVNSGRATREHHIEDTALKTNLEASEE 612
             E ++       V+LKSGGY++I+ TEA+ +ID+N+G      ++E+T   TN+EA++ 
Sbjct: 271 DTENEIQRSLERKVELKSGGYLIIDQTEAMTTIDINTGAFVGRRNLEETIFNTNIEATQA 330

Query: 613 IARQLRLRDLAGLIVIDFIDMEEKRNNRSVERKLKDCLKNDRARIQIGRISHFGLLEMSR 672
           IARQLRLR+L G+I+IDFIDM    + + V   L+  L  DR +  I   +  GL+EM+R
Sbjct: 331 IARQLRLRNLGGIIIIDFIDMASDEHRKRVLTSLETALMKDRVKTNINGFTQLGLVEMTR 390

Query: 673 QRIRTGVLESSIEVCPHCGGTGHVRSAASVSLQLLRALEEQLLRSQTHNLIARTRTEVAL 732
           +R R  +       CP C G G V++  +V  ++LR +            +      VA 
Sbjct: 391 KRTRESIEHVLCSTCPTCEGRGSVKTVETVCFEILREITRVNRAYDADKFVVYASPAVAD 450

Query: 733 YVLNQKRAHLRELE 746
            +  ++   L ELE
Sbjct: 451 TLQGEESHALAELE 464



 Score = 59.7 bits (143), Expect = 5e-13
 Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 1/76 (1%)

Query: 1  MANKMLIDATHPEETRVVVVRGNRVEEFDYESASRKQLRGNIYLAKVTRVEPSLQAAFIE 60
          M+ ++L++ T P ETRV ++ G  ++E   E  +++ + GNIY  KV+RV P +QAAF++
Sbjct: 1  MSAELLLNVT-PSETRVAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVD 59

Query: 61 YGGNRHGFLAFSEIHP 76
           G ++  FL  S+I P
Sbjct: 60 IGLDKAAFLHASDIVP 75