Pairwise Alignments

Query, 1095 a.a., Ribonuclease E from Xanthobacter sp. DMC5

Subject, 502 a.a., ribonuclease G (RefSeq) from Shewanella amazonensis SB2B

 Score =  225 bits (574), Expect = 6e-63
 Identities = 126/338 (37%), Positives = 194/338 (57%), Gaps = 3/338 (0%)

Query: 373 IQEVIRRRQVMLVQVVKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITNAVDR 432
           I E++R+ Q ++VQVVK+  G KGA LTT ++L  RY V MP +A  G +S++I +  +R
Sbjct: 107 IAELVRQGQDIMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGSAHVG-VSQRIESEDER 165

Query: 433 KRLKEVVQDLEVPEGMGIILRTAGANRTKTEIKRDFEYLLRLWETVREMTLSSTAPSLVY 492
            RLKE      V E  G I+RTA       E+ +D  +L R+W  V E        SL+Y
Sbjct: 166 TRLKEATLPF-VDEDGGFIIRTAAEGAGAEELAQDAAFLRRVWAKVAERR-KRKGSSLLY 223

Query: 493 EEGSLIKRAIRDLYNKDIDDIHVAGEEGFREARDFMRMLMPSHAKSVMPYREPQPIFARY 552
           ++ +L  R +RD    D+D I V     F E + F +  MP   + +  Y    PIF  Y
Sbjct: 224 QDLALPVRIVRDFVGTDLDRIQVDSRSTFEELKHFAQEFMPEFEEKIELYSGSVPIFDLY 283

Query: 553 GVEQQLDAMFSPVVQLKSGGYIVINPTEALVSIDVNSGRATREHHIEDTALKTNLEASEE 612
            VE ++       V+LKSGGY++I+ TEA+ ++D+N+G      ++E+T   TNLEA++ 
Sbjct: 284 DVENEIQRALGRKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLEETIFNTNLEATQA 343

Query: 613 IARQLRLRDLAGLIVIDFIDMEEKRNNRSVERKLKDCLKNDRARIQIGRISHFGLLEMSR 672
           IARQLRLR+L G+I+IDFIDM  + + + V   L   L +DR +  +   S  GL+EM+R
Sbjct: 344 IARQLRLRNLGGIIIIDFIDMLSEDHRQRVLSSLTSALAHDRVKTNVSGFSGLGLVEMTR 403

Query: 673 QRIRTGVLESSIEVCPHCGGTGHVRSAASVSLQLLRAL 710
           +R R  +       CP C G+G++++  +V+ ++ R +
Sbjct: 404 KRTRESLEHVLCGECPACKGSGYMKTVETVTYEIFREI 441



 Score = 54.7 bits (130), Expect = 2e-11
 Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 1  MANKMLIDATHPEETRVVVVRGNRVEEFDYESASRKQLRGNIYLAKVTRVEPSLQAAFIE 60
          + +++LI+ T P E RV +V    ++E   E   ++ L GNIY  K++RV P +QAAF++
Sbjct: 15 IGSELLINVT-PNEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKISRVLPGMQAAFVD 73

Query: 61 YGGNRHGFLAFSEIHP 76
           G ++  FL  S+I P
Sbjct: 74 IGLDKAAFLHASDIMP 89