Pairwise Alignments

Query, 807 a.a., Penicillin-binding protein 1A from Xanthobacter sp. DMC5

Subject, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

 Score =  454 bits (1169), Expect = e-132
 Identities = 290/821 (35%), Positives = 432/821 (52%), Gaps = 64/821 (7%)

Query: 5   LRFLGFLFALATLVLLAGAAGATYLVWKYSQDLPDYSQLQNYEPPVMTRVHAADGALVAE 64
           ++F+  L   + + ++ G        +    DLPD + L++ +     +V + DG L+A+
Sbjct: 11  VKFIKRLLVFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQ 70

Query: 65  YAKQRRLYIPIQSVPRLVIEAFLSAEDKNFYEHGGIDPTGIFRAALTFAQNYGKNVRAQG 124
           + ++RR+ + ++ +P+ +IEA ++ ED  +YEH G DP GI RAA     +      +QG
Sbjct: 71  FGEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLAS---GSASQG 127

Query: 125 ASTITQQVAKNFLLTNERSLDRKIKEALLALRIERAYSKDRILELYLNEIYLGMGAYGIA 184
           ASTITQQ+A+NF L+NE+ + RK+KE  +A+ IE+  SK  ILELYLN+IYLG  +YG+ 
Sbjct: 128 ASTITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVG 187

Query: 185 AAALVYFDKSVDELNVQEVAYLAALPKAPSNYNPFRERNRATDRRNWVIDRMVENGFVSQ 244
           AAA  YF K V +L + E+A +A LPKAPS  NP     RAT+RRN V+ RM++  ++++
Sbjct: 188 AAAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITK 247

Query: 245 QEGEAAKRAQLEVTPRATGAQI-FAAEYYAEEVRRQIYERYGERKLYEGGLSVRTPLDPK 303
            E +AA+     V P+  GA+I   A Y AE  R  + ERYGE   Y  G++V T +D K
Sbjct: 248 AEYDAARAE--PVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSK 305

Query: 304 LQVLAKKTLTDGMVRYDEERGWRKPVTHIDLVPGDDW-GVKLGEV--REWTDIPWRLAIV 360
           LQ  A +   + ++ YDE  G+R     +  V    W   +L E    E T      A V
Sbjct: 306 LQRAANQAAINNLLAYDERHGYRGAEKELWQVNQPAWSSTQLSEYLSNEPTYGDMFPAAV 365

Query: 361 LDVSKDNARIGLQPSRTKSGQRSIEREVGLIPAEGAKWTR------------KAINQVLK 408
           L V + +A++ ++              V  I  E   W R            K+ N+ L 
Sbjct: 366 LSVEEKSAQVWVK-----------SYGVQTIAWEDMNWARRFINDDRQGPLPKSANEFLA 414

Query: 409 PGDVVYVEPLGSSGG--QWRLRQPPGVEGAMVVMEPTTGRVLALSGGFSYDESQFNRATQ 466
            G  ++V P    G    W+L Q P    A V M P  G V AL GGF++  ++FNRATQ
Sbjct: 415 AGQQIWVRPRTQDGAITAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQ 474

Query: 467 AMRQPGSSFKPIVYSAALDNGYTPSTIVVDAPFELEQQGQDT-WRPENYSKKYYGPQTLR 525
           ++RQ GSS KP +YSAAL+ G T +T++ DAP     + Q T WRP+N    Y GP  LR
Sbjct: 475 SVRQVGSSIKPFIYSAALNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLR 534

Query: 526 FGLEQSRNVMTVRLANDVGMPIIAEYAKRFGI-YDDMPPYLAMALGSGETTLMRMTGAYA 584
            GL QS+NVM VR+  +VG+    EY  RFG   D +P    +ALG+G  T ++M   ++
Sbjct: 535 IGLAQSKNVMAVRVLREVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFS 594

Query: 585 MIANGGRKVTPSLIDRIQDRYGHTIYRHDEREC--RGCEATKWENQPEPSLIDRRPVVLD 642
           + AN G  V P  I R+++ +G+  +  + +    R C +   E   + +     P V+ 
Sbjct: 595 VFANNGYFVEPFYISRVENPFGNIEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVIS 654

Query: 643 PMTAYQITSMMEGVV-----------QRGTGTALKEL-GKPIAGKTGTTNDEKDAWFIGF 690
              A+    M+   +             GTG   + L  + I GKTGTTND KDAW+ G+
Sbjct: 655 EQNAFLTREMLYSNIWGGGEWSSDTGWNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGY 714

Query: 691 TPEIVVGIYLGY-DKPKPMGK-------------GSTGGLLSAPIARDFMKVAIADRPAI 736
            P IV   ++G+ D  + +GK               +GG  + P   +FM +A+ D P  
Sbjct: 715 APGIVGVAWVGFDDHSRNLGKTAPNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQ 774

Query: 737 PFRVPAGIKLVRIDRKSGQRTSAGDGNAILEAFKPGTAPPD 777
              VP  I  VRIDR +G  T+  D +++ E F+ GT P +
Sbjct: 775 QKAVPNNIARVRIDRDTGLLTNKLDSSSMFEYFEAGTEPTE 815