Pairwise Alignments

Query, 397 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 436 a.a., 3-ketoacyl-CoA thiolase (RefSeq) from Shewanella loihica PV-4

 Score = 44.7 bits (104), Expect = 5e-09
 Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 12/162 (7%)

Query: 215 PVSDGAACAIVTTPEIAKSLGKTPV-LVKAIQLVASNGWEVQSSGWNGSYVHTARIAARR 273
           P++DGA+  ++ +   AK+LG  P+  +K+    A + W+    G +    +   +A +R
Sbjct: 274 PLTDGASAVLLMSESRAKALGYEPIGYIKSYAFSAIDVWQDMLMGPS----YATPLALKR 329

Query: 274 AYAEAGIADPRAQLSFTELHDCFSITELVTLEDIGLADEGTAWKRMLDGAFDADGALPSQ 333
           A  E         L+  E+H+ F+   L  ++    + +    K   D A          
Sbjct: 330 AGMEL------EDLTLIEMHEAFAAQTLANMQMFA-SKKFAKEKLGRDRAIGEIDMTKFN 382

Query: 334 VDGGLKCFGHPVGASGLRMLYECWLQLTGQAGERQLASPSIA 375
           V GG   +GHP  A+G R++ +   +L  + G   LA+   A
Sbjct: 383 VLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLATACAA 424