Pairwise Alignments

Query, 694 a.a., Penicillin-binding protein 1C from Xanthobacter sp. DMC5

Subject, 740 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  160 bits (405), Expect = 2e-43
 Identities = 169/547 (30%), Positives = 241/547 (44%), Gaps = 67/547 (12%)

Query: 84  DVDPRLVDMILAYEDRRFRDHMGVDALALLRAAGQAAGSLRVVSGGSTLTMQVARLTLPP 143
           D  P L   +LA ED RF  H+G+D     RA      S  V  G STLT Q+AR     
Sbjct: 212 DFSPVLPKALLASEDSRFYWHLGIDPYGTARAILTNFRSGEVREGASTLTQQIARSLFSD 271

Query: 144 ---RARTLNAKLAQMRRALELEARLSKDEILSLYLTLAPYGGNIEGVRAASLTYLGKEPR 200
              R  ++  K+ +   AL+LE   SKDE+L  YL    Y G   G   A+  Y GK  R
Sbjct: 272 YVGREDSIGRKVREAILALKLEFFYSKDELLRTYLNRV-YLGVGYGFEDAAQIYFGKSAR 330

Query: 201 RLTLGEAALLVALPQSPETRRPDRYPARAKAARDRVLDRLAAQGIIAPDEVRVA------ 254
            L+  EAALLV L  SP    P    A A+  ++ V++R+ + G+I+ +E R A      
Sbjct: 331 DLSTSEAALLVGLLPSPNGFSPCTNLAAAQRQKNGVIERMQSLGLISEEEARTARRSPVT 390

Query: 255 -KAEAVPTARRL-LPQIAPHLSEEMA-------AERPDLARHLTTLDAPLQERLEELVRE 305
            K EA  T+ R+  P     + EE+A        E  + A   T+L+  +Q   E+ ++ 
Sbjct: 391 IKPEACQTSSRVTAPYYYGAVVEELAQLVGDTVVEEGNFAVE-TSLNPAMQTAAEQSLQS 449

Query: 306 RTRTLGRGLSAAIVVMDNESAEVRAYVAAAVYFDRDRAGAVDLA-RAVRSPGSTLKPFIY 364
                      AIV +D+ + E+RA V    Y    +A   D A +A R PGST K F Y
Sbjct: 450 LLAQTAGVKQGAIVTIDSRNGEIRALVGGVDY----QASQFDRATQAYRQPGSTFKVFAY 505

Query: 365 ALAFEDGIAHPETLIEDRPARFG--AWRPENFD--RTFQGTLSVRKALQLSLNVPAVRLL 420
           A A E GI+        RP       W+ + F       G++ + +AL  S N  A+R+ 
Sbjct: 506 AAALEQGIS------AGRPYDCSPLVWQGQQFRGCERSSGSIDLARALAQSENAVALRVA 559

Query: 421 EAVGPQRLASRMQQAGGRLELPPGAAPALPMGLGGVGIRLIDLTTLYAALARGGEAHAP- 479
             VG   +    ++ G + +L P   P L +G   V   L+++T+ +AA+A  G  + P 
Sbjct: 560 REVGLDAVVQMARKFGIKADLQP--VPGLVLGQSEV--TLLEMTSAFAAIANEGRWNPPH 615

Query: 480 -VFRRGDGAVAA-----------------PRKARLVDEVA-----AWYVGQCLLGTPAPE 516
            + R  D +                    PR+ R+V   A        + Q +       
Sbjct: 616 AIRRIYDSSRCTTAEQRRSCTLTFDVQQQPRRDRVVISAATAATLTAMLQQAVSSGTGGA 675

Query: 517 NALGGRIAFKTGTSYGYRDSWAVGFDGRR--TVGVWVGRPDGQAVPDLTGRAAAAPLLFD 574
            A+G   A KTGT+    D W VGF   R    GVW+G  D Q  P     + AA L  D
Sbjct: 676 AAIGYGAAGKTGTTNDGVDLWFVGFVPSRHLVTGVWLGNDDNQ--PTGNSSSLAAQLWGD 733

Query: 575 AFARIVR 581
             ARI+R
Sbjct: 734 YMARILR 740