Pairwise Alignments

Query, 491 a.a., Deoxyribodipyrimidine photo-lyase from Xanthobacter sp. DMC5

Subject, 504 a.a., cryptochrome-like protein cry2 from Vibrio cholerae E7946 ATCC 55056

 Score =  121 bits (303), Expect = 6e-32
 Identities = 125/480 (26%), Positives = 208/480 (43%), Gaps = 37/480 (7%)

Query: 6   SLLWFRDDLRLADNPALNALAETGAPIAALYVLDEDSPHIRPLGAA---ARWW--LAQSL 60
           +L+W + DLRL D+  L A   +G P   LY+ +   P +  LG A    R W  + QSL
Sbjct: 5   NLVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFE---PML--LGDAHYSERHWRFVWQSL 59

Query: 61  RALRADLSHHGIPLILRQGPATRIVPEVAAALGAATVAFNDRAGEAEGKLDRAITARLAA 120
           +A+  DL+     +++           +A       +  +   G A         A+   
Sbjct: 60  QAINRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLACTFQRDLALAQWCQ 119

Query: 121 EDRRVLHFCAHLLHPPGTVLGGSGRMPRTFSSFHRAALRERDLSPPLPAPKRLKGVTRAP 180
           +   V H       P   V+ G+ +  + +    +  +R     P L     LK +  A 
Sbjct: 120 QHDIVWHE-----FPYAAVIRGA-QTRKNWDEHWQQVMRSPCCDPDLTRANWLK-LDAAT 172

Query: 181 EGDTLESFALEPEKPDWAGGLRTAWHVGEAAARQRLSAFIADGLKGYATGRDRPDLEH-- 238
            G   +  A    K     G++T    G   A   L  F A   + Y      P L    
Sbjct: 173 LGLRSDIPATWQSKQ---AGMQTG---GSDMAWATLEDFFARRGREYYRSISSPSLARHA 226

Query: 239 VSRLSPHLRFGEMSPRQIFFAV-RHAVDAGEVPGSDAAKFEAELYWREFSYHLLAEDPDI 297
            SR+SP+L +G +S R+++  + +H   AG      A    + L+W          + ++
Sbjct: 227 CSRMSPYLAWGNISLREMYQTLLKHWSVAGFRRSLIA--LSSRLHWHCHFIQKFESECEM 284

Query: 298 ARRNIQQSFDAFPWREC---SGELKAWRRGLTGYPLVDAGMRQLWQTGWMHNRVRMVVAS 354
             R + +++D+   +     + +L AW+ G TG PLVDA MR L QTG+++ R+R ++ S
Sbjct: 285 EFRCVNRAYDSLLQQSSDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVS 344

Query: 355 FLAKHLLIDWRAGEDWFWDTLVDADAANNAASWQWVAGSGLDAAPYFRIFNPVMQGEKFD 414
            L  H+ +DWRAG  +     +D +   +   +Q  A  G+      RI+NP  Q ++ D
Sbjct: 345 VLTHHMNVDWRAGVTYLAQLFLDFEPGIHYPQFQMQA--GVTGTNTIRIYNPTKQAQEHD 402

Query: 415 PDGTYVRTYVPELKRLPAKLIHQPWTAPQDTLAAAGIRLGHTYPKPLVDHAA----ARDR 470
            +G ++  +VPEL ++P  L+ +PW           + L   Y KP++D  A    ARDR
Sbjct: 403 SEGQFIHKWVPELAQVPVPLLFEPWLMTPLEAQMYQVPLESPYLKPVMDLEASAKQARDR 462